RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
LRTOMT-219ENST00000541899 USP50Q70EL3 339 aaPredicted RBP18.7■□□□□ 0.58
LRTOMT-219ENST00000541899 FAM227BQ96M60 508 aa18.7■□□□□ 0.58
LRTOMT-219ENST00000541899 A0A0D9SFI3 127 aa18.69■□□□□ 0.58
LRTOMT-219ENST00000541899 WNT10BO00744 389 aa18.69■□□□□ 0.58
LRTOMT-219ENST00000541899 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
LRTOMT-219ENST00000541899 KIF4BQ2VIQ3 1234 aa18.69■□□□□ 0.58
LRTOMT-219ENST00000541899 CWC27Q6UX04 472 aaKnown RBP18.69■□□□□ 0.58
LRTOMT-219ENST00000541899 SAMD7Q7Z3H4 446 aa18.69■□□□□ 0.58
LRTOMT-219ENST00000541899 AIDAQ96BJ3 306 aa18.69■□□□□ 0.58
LRTOMT-219ENST00000541899 MYO1BO43795 1136 aa18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 GNAT2P19087 354 aa18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 EPHX2P34913 555 aa18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 RHBDL3P58872 404 aa18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 PNMA8AQ86V59 439 aaPredicted RBP18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 STRBPQ96SI9 672 aaKnown RBP18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 SEC62Q99442 399 aaKnown RBP18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 TAF1DQ9H5J8 278 aaPredicted RBP18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 AATFQ9NY61 560 aaKnown RBP eCLIP18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
LRTOMT-219ENST00000541899 FOCADQ5VW36 1801 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 M0R2C6 588 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 SGSM2O43147 1006 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 GPAA1O43292 621 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 MBD4O95243 580 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 EGFRP00533 1210 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 TBC1D10BQ4KMP7 808 aaPredicted RBP18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 FKBP1CQ5VVH2 108 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 CDC42EP5Q6NZY7 148 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 MIGA1Q8NAN2 632 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 ESYT1Q9BSJ8 1104 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 PCDHAC2Q9Y5I4 1007 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 CDK5RAP2Q96SN8 1893 aa18.67■□□□□ 0.58
LRTOMT-219ENST00000541899 EIF5BO60841 1220 aaKnown RBP18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 HIRAP54198 1017 aaPredicted RBP18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 DYNLL1P63167 89 aaKnown RBP18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 NBPF9Q3BBW0 867 aa18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 SPDYE2Q495Y8 402 aa18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 LCORLQ8N3X6 602 aa18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 TRPM4Q8TD43 1214 aa18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 ZC3H15Q8WU90 426 aaKnown RBP18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 IDI2Q9BXS1 227 aa18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 TDRD3Q9H7E2 651 aaKnown RBP18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 CCDC171Q6TFL3 1326 aa18.66■□□□□ 0.58
LRTOMT-219ENST00000541899 RBM26Q5T8P6 1007 aaKnown RBP18.65■□□□□ 0.58
LRTOMT-219ENST00000541899 SH3RF3Q8TEJ3 882 aaPredicted RBP18.65■□□□□ 0.58
LRTOMT-219ENST00000541899 CRNKL1Q9BZJ0 848 aaKnown RBP18.65■□□□□ 0.58
LRTOMT-219ENST00000541899 ARMT1Q9H993 441 aa18.65■□□□□ 0.58
LRTOMT-219ENST00000541899 RRAGCQ9HB90 399 aa18.65■□□□□ 0.58
LRTOMT-219ENST00000541899 ZNF70Q9UC06 446 aaPredicted RBP18.65■□□□□ 0.58
LRTOMT-219ENST00000541899 PITPNM2Q9BZ72 1349 aa18.65■□□□□ 0.58
LRTOMT-219ENST00000541899 PATL2C9JE40 543 aaKnown RBP18.64■□□□□ 0.57
LRTOMT-219ENST00000541899 WDHD1O75717 1129 aaPredicted RBP18.64■□□□□ 0.57
LRTOMT-219ENST00000541899 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.57
LRTOMT-219ENST00000541899 ZNF589Q86UQ0 364 aaPredicted RBP18.64■□□□□ 0.57
LRTOMT-219ENST00000541899 IL25Q9H293 177 aa18.64■□□□□ 0.57
LRTOMT-219ENST00000541899 ATP8A2Q9NTI2 1148 aa18.64■□□□□ 0.57
LRTOMT-219ENST00000541899 CCDC129Q6ZRS4 1044 aa18.63■□□□□ 0.57
LRTOMT-219ENST00000541899 TEX11Q8IYF3 940 aa18.63■□□□□ 0.57
LRTOMT-219ENST00000541899 TMOD2Q9NZR1 351 aa18.63■□□□□ 0.57
LRTOMT-219ENST00000541899 MKRN1Q9UHC7 482 aaKnown RBP18.63■□□□□ 0.57
LRTOMT-219ENST00000541899 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
LRTOMT-219ENST00000541899 HSPD1P10809 573 aaKnown RBP18.62■□□□□ 0.57
LRTOMT-219ENST00000541899 ALX1Q15699 326 aa18.62■□□□□ 0.57
LRTOMT-219ENST00000541899 C8orf34Q49A92 452 aa18.62■□□□□ 0.57
LRTOMT-219ENST00000541899 FAM83AQ86UY5 434 aa18.62■□□□□ 0.57
LRTOMT-219ENST00000541899 DSCC1Q9BVC3 393 aa18.62■□□□□ 0.57
LRTOMT-219ENST00000541899 SLC4A4Q9Y6R1 1079 aa18.62■□□□□ 0.57
LRTOMT-219ENST00000541899 ZMYM6O95789 1325 aa18.61■□□□□ 0.57
LRTOMT-219ENST00000541899 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
LRTOMT-219ENST00000541899 ENTPD3O75355 529 aa18.61■□□□□ 0.57
LRTOMT-219ENST00000541899 TNFAIP1Q13829 316 aa18.61■□□□□ 0.57
LRTOMT-219ENST00000541899 APOBEC3FQ8IUX4 373 aaKnown RBP18.61■□□□□ 0.57
LRTOMT-219ENST00000541899 TGFBRAP1Q8WUH2 860 aa18.61■□□□□ 0.57
LRTOMT-219ENST00000541899 NMRK2Q9NPI5 230 aa18.61■□□□□ 0.57
LRTOMT-219ENST00000541899 COL2A1P02458 1487 aaPredicted RBP18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 CLRN2A0PK11 232 aa18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 FOXP2O15409 715 aa18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 PRKAB2O43741 272 aa18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 TNNI2P48788 182 aa18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 NACAP1Q9BZK3 213 aa18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 DCP1AQ9NPI6 582 aaPredicted RBP18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 FAM198AQ9UFP1 575 aa18.6■□□□□ 0.57
LRTOMT-219ENST00000541899 FLT1P17948 1338 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 REC8O95072 547 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 USP5P45974 858 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 NFIAQ12857 509 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 VPS53Q5VIR6 699 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 ANGEL2Q5VTE6 544 aaKnown RBP18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 KIAA1211Q6ZU35 1233 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 IFNL3Q8IZI9 196 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 SDR42E1Q8WUS8 393 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 FAM151AQ8WW52 585 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 MAP4K1Q92918 833 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 LSG1Q9H089 658 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms