RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 BRAPQ7Z569 592 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 SDCCAG8Q86SQ7 713 aaPredicted RBP12.02□□□□□ -0.49
GABRB3-204ENST00000541819 UBL4BQ8N7F7 174 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 CNGA4Q8IV77 575 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 ZNF830Q96NB3 372 aaPredicted RBP12.02□□□□□ -0.49
GABRB3-204ENST00000541819 PLIN2Q99541 437 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 LZTFL1Q9NQ48 299 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 DACT1Q9NYF0 836 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 IL16Q14005 1332 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 NMIQ13287 307 aaPredicted RBP12.02□□□□□ -0.49
GABRB3-204ENST00000541819 HAUS3Q68CZ6 603 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 ZNF365Q70YC5 407 aa12.02□□□□□ -0.49
GABRB3-204ENST00000541819 PLCD1P51178 756 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 HOOK2Q96ED9 719 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 CD109Q6YHK3 1445 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 CHMP2AO43633 222 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 TUBBP07437 444 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 TRAF5O00463 557 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 ACTN4O43707 911 aaKnown RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 ANXA1P04083 346 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 DNAJC21Q5F1R6 531 aaKnown RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 VCXQ9H320 206 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 RHOXF2BP0C7M4 288 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 NAA25Q14CX7 972 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 ASIC2Q16515 512 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 RHOXF2Q9BQY4 288 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 ESYT1Q9BSJ8 1104 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 NOC4LQ9BVI4 516 aaKnown RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 WWC3Q9ULE0 1092 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 UTP11Q9Y3A2 253 aaKnown RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 CLGNO14967 610 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 WDR46O15213 610 aaKnown RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 IRX5P78411 483 aaPredicted RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 CCDC94Q9BW85 323 aaPredicted RBP12.01□□□□□ -0.49
GABRB3-204ENST00000541819 CTNND2Q9UQB3 1225 aa12.01□□□□□ -0.49
GABRB3-204ENST00000541819 CETN3O15182 167 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 C20orf194Q5TEA3 1177 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 ZNF408Q9H9D4 720 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 GBP1P32455 592 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 PPP2R5DQ14738 602 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 KSR2Q6VAB6 950 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 ANKRD36BQ8N2N9 1353 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 IRS4O14654 1257 aaPredicted RBP12□□□□□ -0.49
GABRB3-204ENST00000541819 PPP2R5CQ13362 524 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 CCDC122Q5T0U0 273 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 CNNM4Q6P4Q7 775 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 RIOK1Q9BRS2 568 aaKnown RBP12□□□□□ -0.49
GABRB3-204ENST00000541819 ACEP12821 1306 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 SDSP20132 328 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 LETM2Q2VYF4 491 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 TTC31Q49AM3 519 aaPredicted RBP12□□□□□ -0.49
GABRB3-204ENST00000541819 AZI2Q9H6S1 392 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 SNAPC4Q5SXM2 1469 aa12□□□□□ -0.49
GABRB3-204ENST00000541819 FAM83GA6ND36 823 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 TRIM14Q14142 442 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 HACE1Q8IYU2 909 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 DNM2P50570 870 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 PSMD6Q15008 389 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
GABRB3-204ENST00000541819 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 SAP30BPQ9UHR5 308 aaKnown RBP11.99□□□□□ -0.49
GABRB3-204ENST00000541819 ARHGEF35A5YM69 484 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 NUCB1Q02818 461 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 LGSNQ5TDP6 509 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 TEX11Q8IYF3 940 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 GLT8D2Q9H1C3 349 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 MAST3O60307 1309 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 CCDC62Q6P9F0 684 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 CARD10Q9BWT7 1032 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 HDXQ7Z353 690 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 TTC41PQ6P2S7 1318 aa11.99□□□□□ -0.49
GABRB3-204ENST00000541819 WDR7Q9Y4E6 1490 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 AKR1B15C9JRZ8 316 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-204ENST00000541819 I3L4J1 428 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 DNM1Q05193 864 aaKnown RBP11.98□□□□□ -0.49
GABRB3-204ENST00000541819 APOBRQ0VD83 1088 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 ZBED4O75132 1171 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 LMNTD2Q8IXW0 634 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 CLSTN2Q9H4D0 955 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 ZHX1Q9UKY1 873 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-204ENST00000541819 CD2APQ9Y5K6 639 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 MYCLP12524 364 aaPredicted RBP11.98□□□□□ -0.49
GABRB3-204ENST00000541819 TYRO3Q06418 890 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 GINS2Q9Y248 185 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 VWA3AA6NCI4 1184 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 KIF11P52732 1056 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 PDE1AP54750 535 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 SLC12A2P55011 1212 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 PDE4DQ08499 809 aa11.98□□□□□ -0.49
GABRB3-204ENST00000541819 ARHGAP24Q8N264 748 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms