RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PXYLP1Q8TE99 480 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 FAM205AQ6ZU69 1335 aa12.58□□□□□ -0.4
CHFR-220ENST00000541817 IL1R1P14778 569 aa12.57□□□□□ -0.4
CHFR-220ENST00000541817 ITGA6P23229 1130 aa12.57□□□□□ -0.4
CHFR-220ENST00000541817 CRKP46108 304 aa12.57□□□□□ -0.4
CHFR-220ENST00000541817 PPATQ06203 517 aa12.57□□□□□ -0.4
CHFR-220ENST00000541817 LRRC26Q2I0M4 334 aa12.57□□□□□ -0.4
CHFR-220ENST00000541817 ELL2O00472 640 aaPredicted RBP12.56□□□□□ -0.4
CHFR-220ENST00000541817 PLIN1O60240 522 aa12.56□□□□□ -0.4
CHFR-220ENST00000541817 FOSL2P15408 326 aa12.56□□□□□ -0.4
CHFR-220ENST00000541817 TMPOP42166 694 aaKnown RBP12.56□□□□□ -0.4
CHFR-220ENST00000541817 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
CHFR-220ENST00000541817 IRF5Q13568 498 aa12.56□□□□□ -0.4
CHFR-220ENST00000541817 TJAP1Q5JTD0 557 aa12.56□□□□□ -0.4
CHFR-220ENST00000541817 ZNF804AQ7Z570 1209 aa12.56□□□□□ -0.4
CHFR-220ENST00000541817 ANKLE1Q8NAG6 615 aa12.56□□□□□ -0.4
CHFR-220ENST00000541817 PARK7Q99497 189 aaKnown RBP12.56□□□□□ -0.4
CHFR-220ENST00000541817 METTL22Q9BUU2 404 aaPredicted RBP12.56□□□□□ -0.4
CHFR-220ENST00000541817 TTYH1Q9H313 450 aaPredicted RBP12.56□□□□□ -0.4
CHFR-220ENST00000541817 COL2A1P02458 1487 aaPredicted RBP12.56□□□□□ -0.4
CHFR-220ENST00000541817 IGKV5-2P06315 115 aa12.55□□□□□ -0.4
CHFR-220ENST00000541817 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
CHFR-220ENST00000541817 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
CHFR-220ENST00000541817 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
CHFR-220ENST00000541817 KCNH4Q9UQ05 1017 aa12.55□□□□□ -0.4
CHFR-220ENST00000541817 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
CHFR-220ENST00000541817 HMX1Q9NP08 348 aaPredicted RBP12.54□□□□□ -0.4
CHFR-220ENST00000541817 SERPINA10Q9UK55 444 aa12.54□□□□□ -0.4
CHFR-220ENST00000541817 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 CAPN2P17655 700 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 SHHQ15465 462 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 GADL1Q6ZQY3 521 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 ANKRD13CQ8N6S4 541 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
CHFR-220ENST00000541817 ZNF341Q9BYN7 854 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 OGDHLQ9ULD0 1010 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 MUC3AQ02505 3323 aa12.53□□□□□ -0.4
CHFR-220ENST00000541817 AK9Q5TCS8 1911 aa12.52□□□□□ -0.4
CHFR-220ENST00000541817 HOXB7P09629 217 aa12.52□□□□□ -0.41
CHFR-220ENST00000541817 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.41
CHFR-220ENST00000541817 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
CHFR-220ENST00000541817 CCDC146Q8IYE0 955 aa12.52□□□□□ -0.41
CHFR-220ENST00000541817 PPM1EQ8WY54 764 aa12.52□□□□□ -0.41
CHFR-220ENST00000541817 COA7Q96BR5 231 aa12.52□□□□□ -0.41
CHFR-220ENST00000541817 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
CHFR-220ENST00000541817 IQSEC3Q9UPP2 1182 aaPredicted RBP12.52□□□□□ -0.41
CHFR-220ENST00000541817 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
CHFR-220ENST00000541817 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
CHFR-220ENST00000541817 HMGCRP04035 888 aa12.51□□□□□ -0.41
CHFR-220ENST00000541817 GYG1P46976 350 aa12.51□□□□□ -0.41
CHFR-220ENST00000541817 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
CHFR-220ENST00000541817 LMOD3Q0VAK6 560 aa12.5□□□□□ -0.41
CHFR-220ENST00000541817 TCP10Q12799 353 aa12.5□□□□□ -0.41
CHFR-220ENST00000541817 CHAF1AQ13111 956 aaPredicted RBP12.5□□□□□ -0.41
CHFR-220ENST00000541817 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
CHFR-220ENST00000541817 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
CHFR-220ENST00000541817 H7C1W4 665 aa12.49□□□□□ -0.41
CHFR-220ENST00000541817 COL6A1P12109 1028 aa12.49□□□□□ -0.41
CHFR-220ENST00000541817 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
CHFR-220ENST00000541817 TDRD7Q8NHU6 1098 aaKnown RBP12.49□□□□□ -0.41
CHFR-220ENST00000541817 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
CHFR-220ENST00000541817 TRIB2Q92519 343 aa12.49□□□□□ -0.41
CHFR-220ENST00000541817 ZNF594Q96JF6 807 aaPredicted RBP12.49□□□□□ -0.41
CHFR-220ENST00000541817 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
CHFR-220ENST00000541817 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
CHFR-220ENST00000541817 CSF1RP07333 972 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 SLURP2P0DP57 97 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 CYP2B6P20813 491 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
CHFR-220ENST00000541817 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 TMOD2Q9NZR1 351 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.48□□□□□ -0.41
CHFR-220ENST00000541817 ZNF112Q9UJU3 913 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 ZHX2Q9Y6X8 837 aa12.48□□□□□ -0.41
CHFR-220ENST00000541817 PLXNB2O15031 1838 aa12.47□□□□□ -0.41
CHFR-220ENST00000541817 A0A0G2JLL6 359 aaPredicted RBP12.47□□□□□ -0.41
CHFR-220ENST00000541817 CXCL11O14625 94 aa12.47□□□□□ -0.41
CHFR-220ENST00000541817 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
CHFR-220ENST00000541817 GRIN2CQ14957 1233 aa12.47□□□□□ -0.41
CHFR-220ENST00000541817 PRRT2Q7Z6L0 340 aaPredicted RBP12.47□□□□□ -0.41
CHFR-220ENST00000541817 CCDC84Q86UT8 332 aaPredicted RBP12.47□□□□□ -0.41
CHFR-220ENST00000541817 FAM83AQ86UY5 434 aa12.47□□□□□ -0.41
CHFR-220ENST00000541817 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
CHFR-220ENST00000541817 NECAB3Q96P71 396 aaPredicted RBP12.47□□□□□ -0.41
CHFR-220ENST00000541817 SENP6Q9GZR1 1112 aaPredicted RBP12.47□□□□□ -0.41
CHFR-220ENST00000541817 GJD2Q9UKL4 321 aa12.47□□□□□ -0.41
CHFR-220ENST00000541817 PEX10O60683 326 aa12.46□□□□□ -0.41
CHFR-220ENST00000541817 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
CHFR-220ENST00000541817 HIBADHP31937 336 aaKnown RBP12.46□□□□□ -0.41
CHFR-220ENST00000541817 APOBEC3HQ6NTF7 200 aaKnown RBP12.46□□□□□ -0.41
CHFR-220ENST00000541817 KSR2Q6VAB6 950 aa12.46□□□□□ -0.41
CHFR-220ENST00000541817 TEKT1Q969V4 418 aa12.46□□□□□ -0.41
CHFR-220ENST00000541817 CDH23Q9H251 3354 aa12.46□□□□□ -0.41
CHFR-220ENST00000541817 LTBP2Q14767 1821 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms