RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 GGA1Q9UJY5 639 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 NSFL1CQ9UNZ2 370 aaKnown RBP6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 BCS1LQ9Y276 419 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 GTF3C3Q9Y5Q9 886 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 FPGT-TNNI3KV9GXZ4 949 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 ZNF804BA4D1E1 1349 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 IRS2Q9Y4H2 1338 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 A0A1B0GUL7 405 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 ZNF609O15014 1411 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 TAF5LO75529 589 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 COL4A1P02462 1669 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 IFIT1P09914 478 aaKnown RBP6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 SLC5A1P13866 664 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 LAMB2P55268 1798 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 FKBP4Q02790 459 aaKnown RBP eCLIP6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 PUS10Q3MIT2 529 aaKnown RBP6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 DPP8Q6V1X1 898 aaPredicted RBP6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 FBXO33Q7Z6M2 555 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 SLC51AQ86UW1 340 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 HELBQ8NG08 1087 aaPredicted RBP6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 TBC1D16Q8TBP0 767 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 EYA3Q99504 573 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 REPIN1Q9BWE0 567 aaKnown RBP6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 SALL3Q9BXA9 1300 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 STAP2Q9UGK3 403 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 POLLQ9UGP5 575 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 MED23Q9ULK4 1368 aa6.12□□□□□ -1.43
SPARCL1-209ENST00000541496 DDX60Q8IY21 1712 aaKnown RBP6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 AOX1Q06278 1338 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 TTC41PQ6P2S7 1318 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 SNAP23O00161 211 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 NFKBIEO00221 500 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 HOXA2O43364 376 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 GRIN3BO60391 1043 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 GFRA3O60609 400 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 UFL1O94874 794 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 IFIT2P09913 472 aaKnown RBP6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 KCNJ4P48050 445 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 TIMM10P62072 90 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 KIAA2012Q0VF49 1180 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 OLFM4Q6UX06 510 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 AACSQ86V21 672 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 NKX2-3Q8TAU0 364 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 XAGE2Q96GT9 111 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 FAM84BQ96KN1 310 aaPredicted RBP6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 SPSB2Q99619 263 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 LNPKQ9C0E8 428 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 TAOK3Q9H2K8 898 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 OSBPL3Q9H4L5 887 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 IL1RAPL2Q9NP60 686 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 DBNLQ9UJU6 430 aaKnown RBP6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 SLC27A5Q9Y2P5 690 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 KIF13BQ9NQT8 1826 aa6.11□□□□□ -1.43
SPARCL1-209ENST00000541496 PDS5AQ29RF7 1337 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 WTIPA6NIX2 430 aaPredicted RBP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 C6orf229H3BNL8 230 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 APBB1O00213 710 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 SMARCA5O60264 1052 aaPredicted RBP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 IGSF3O75054 1194 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 UQCRFS1P1P0C7P4 283 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 IL1R1P14778 569 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 YBX3P16989 372 aaKnown RBP eCLIP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 ATP5JP18859 108 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 MX1P20591 662 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 ARID4AP29374 1257 aaPredicted RBP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 ADORA1P30542 326 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 PDE1AP54750 535 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 WASHC4Q2M389 1173 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 CAVIN4Q5BKX8 364 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 CCDC102BQ68D86 513 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 ZNF804AQ7Z570 1209 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 TXNRD3Q86VQ6 643 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 TDRD7Q8NHU6 1098 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 GPATCH3Q96I76 525 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 DBNDD2Q9BQY9 259 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 ZC3H12CQ9C0D7 883 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 SLC6A16Q9GZN6 736 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 COA1Q9GZY4 146 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 ECHDC1Q9NTX5 307 aa6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 TLR7Q9NYK1 1049 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-209ENST00000541496 ANKRD31Q8N7Z5 1873 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 AFDNP55196 1824 aaKnown RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 COL11A2P13942 1736 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 KIAA1551Q9HCM1 1747 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 ERC2O15083 957 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 PPIP5K2O43314 1243 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 TLL1O43897 1013 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 GLRX3O76003 335 aaKnown RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 KLRK1P26718 216 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 HIBADHP31937 336 aaKnown RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 GJA5P36382 358 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 PHKA1P46020 1223 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 LAPTM4AQ15012 233 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 MSS51Q4VC12 460 aa6.09□□□□□ -1.43
SPARCL1-209ENST00000541496 CCDC158Q5M9N0 1113 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms