RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
SUDS3-202ENST00000541280 LRP8Q14114 963 aa8.73□□□□□ -1.01
SUDS3-202ENST00000541280 DUOXA2Q1HG44 320 aa8.73□□□□□ -1.01
SUDS3-202ENST00000541280 VN1R5Q7Z5H4 357 aa8.73□□□□□ -1.01
SUDS3-202ENST00000541280 FAM46AQ96IP4 442 aaKnown RBP8.73□□□□□ -1.01
SUDS3-202ENST00000541280 RNF112Q9ULX5 631 aa8.73□□□□□ -1.01
SUDS3-202ENST00000541280 HECW2Q9P2P5 1572 aa8.73□□□□□ -1.01
SUDS3-202ENST00000541280 ZMYM3Q14202 1370 aa8.73□□□□□ -1.01
SUDS3-202ENST00000541280 CCDC141Q6ZP82 1450 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 SYCP2Q9BX26 1530 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 H3BRB1 525 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 KIF3BO15066 747 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 DDX3YO15523 660 aaKnown RBP8.72□□□□□ -1.01
SUDS3-202ENST00000541280 FSTP19883 344 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 PDE4CQ08493 712 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 ARMC10Q8N2F6 343 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 UBASH3BQ8TF42 649 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
SUDS3-202ENST00000541280 SOX17Q9H6I2 414 aaPredicted RBP8.72□□□□□ -1.01
SUDS3-202ENST00000541280 ZFP64Q9NPA5 681 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 SAMD9LQ8IVG5 1584 aa8.72□□□□□ -1.01
SUDS3-202ENST00000541280 SCO2A0A1W2PP80 73 aa8.71□□□□□ -1.02
SUDS3-202ENST00000541280 GLYCTKQ8IVS8 523 aa8.71□□□□□ -1.02
SUDS3-202ENST00000541280 RETREG2Q8NC44 543 aa8.71□□□□□ -1.02
SUDS3-202ENST00000541280 RAXQ9Y2V3 346 aa8.71□□□□□ -1.02
SUDS3-202ENST00000541280 WASHC2CQ9Y4E1 1318 aa8.71□□□□□ -1.02
SUDS3-202ENST00000541280 BCORL1Q5H9F3 1711 aa8.71□□□□□ -1.02
SUDS3-202ENST00000541280 MEGF11A6BM72 1044 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 ARL4DP49703 201 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 C19orf57Q0VDD7 668 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 GALNT12Q8IXK2 581 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 CITED4Q96RK1 184 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 FAM129BQ96TA1 746 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 LATS2Q9NRM7 1088 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 BRPF3Q9ULD4 1205 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 LRRIQ1Q96JM4 1722 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 CDC42BPBQ9Y5S2 1711 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 CAMSAP2Q08AD1 1489 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 ATP7AQ04656 1500 aa8.7□□□□□ -1.02
SUDS3-202ENST00000541280 DIP2CQ9Y2E4 1556 aa8.69□□□□□ -1.02
SUDS3-202ENST00000541280 SOX1O00570 391 aaPredicted RBP8.69□□□□□ -1.02
SUDS3-202ENST00000541280 GSC2O15499 205 aa8.69□□□□□ -1.02
SUDS3-202ENST00000541280 DHX15O43143 795 aaKnown RBP8.69□□□□□ -1.02
SUDS3-202ENST00000541280 IKBKEQ14164 716 aa8.69□□□□□ -1.02
SUDS3-202ENST00000541280 ANKRD34AQ69YU3 496 aa8.69□□□□□ -1.02
SUDS3-202ENST00000541280 RNF208Q9H0X6 261 aa8.69□□□□□ -1.02
SUDS3-202ENST00000541280 NPATQ14207 1427 aa8.69□□□□□ -1.02
SUDS3-202ENST00000541280 UHRF1BP1Q6BDS2 1440 aa8.69□□□□□ -1.02
SUDS3-202ENST00000541280 SUPT6HQ7KZ85 1726 aaKnown RBP8.68□□□□□ -1.02
SUDS3-202ENST00000541280 HGSNATQ68CP4 663 aa8.68□□□□□ -1.02
SUDS3-202ENST00000541280 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.68□□□□□ -1.02
SUDS3-202ENST00000541280 SLC7A3Q8WY07 619 aa8.68□□□□□ -1.02
SUDS3-202ENST00000541280 MYRFLQ96LU7 910 aa8.68□□□□□ -1.02
SUDS3-202ENST00000541280 NDUFB5O43674 189 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
SUDS3-202ENST00000541280 IGHA2P01877 340 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 NEFLP07196 543 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 ESRRAP11474 423 aaPredicted RBP8.67□□□□□ -1.02
SUDS3-202ENST00000541280 HSPA2P54652 639 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 NLRP12P59046 1061 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 PDE3BQ13370 1112 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 CDC42BPAQ5VT25 1732 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 CCNJLQ8IV13 435 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 MADDQ8WXG6 1647 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 UTP4Q969X6 686 aaKnown RBP8.67□□□□□ -1.02
SUDS3-202ENST00000541280 ARID3AQ99856 593 aa8.67□□□□□ -1.02
SUDS3-202ENST00000541280 ARHGEF5Q12774 1597 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 LMTK3Q96Q04 1460 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 ANKRD30AQ9BXX3 1397 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 A0A1W2PP55 124 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 HYAL3O43820 417 aaPredicted RBP8.66□□□□□ -1.02
SUDS3-202ENST00000541280 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 FAM50AQ14320 339 aaKnown RBP8.66□□□□□ -1.02
SUDS3-202ENST00000541280 KIAA0319Q5VV43 1072 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 RUSC1Q9BVN2 902 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 RRP7BPQ9NSQ0 103 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 STOML1Q9UBI4 398 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 HIF3AQ9Y2N7 669 aa8.66□□□□□ -1.02
SUDS3-202ENST00000541280 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 ABCC5O15440 1437 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 FGD6Q6ZV73 1430 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 POLR3DP05423 398 aaPredicted RBP8.65□□□□□ -1.02
SUDS3-202ENST00000541280 FAM20CQ8IXL6 584 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 ASAP3Q8TDY4 903 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 TCF12Q99081 682 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 NRSN2Q9GZP1 204 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 SUGCTQ9HAC7 445 aa8.65□□□□□ -1.02
SUDS3-202ENST00000541280 KIDINS220Q9ULH0 1771 aa8.64□□□□□ -1.03
SUDS3-202ENST00000541280 THEMISQ8N1K5 641 aaPredicted RBP8.64□□□□□ -1.03
SUDS3-202ENST00000541280 ABCA6Q8N139 1617 aa8.64□□□□□ -1.03
SUDS3-202ENST00000541280 FAM135AQ9P2D6 1515 aa8.64□□□□□ -1.03
SUDS3-202ENST00000541280 TCOF1Q13428 1488 aaKnown RBP8.64□□□□□ -1.03
SUDS3-202ENST00000541280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.63□□□□□ -1.03
SUDS3-202ENST00000541280 KIF15Q9NS87 1388 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 A0A096LPE4 126 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 LOC100289279A0A1B0GTE1 492 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 METTL12A8MUP2 240 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 PREPP48147 710 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms