RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-204ENST00000541225 MEA1Q16626 185 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 TWISTNBQ3B726 338 aaPredicted RBP5.61□□□□□ -1.51
ABCA8-204ENST00000541225 GIMAP6Q6P9H5 292 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 CDC37L1Q7L3B6 337 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 CNKSR1Q969H4 720 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 KAZALD1Q96I82 304 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 PNKPQ96T60 521 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 PARD6BQ9BYG5 372 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 HMG20BQ9P0W2 317 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 CTNNAL1Q9UBT7 734 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 TSKSQ9UJT2 592 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 TMEM59LQ9UK28 342 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 HDAC5Q9UQL6 1122 aa5.61□□□□□ -1.51
ABCA8-204ENST00000541225 VGLL3A8MV65 326 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 POTEB2H3BUK9 544 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 PPP1R37O75864 691 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 GHRP10912 638 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 RPS6KB1P23443 525 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 HNRNPH3P31942 346 aaKnown RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 HNRNPH1P31943 449 aaKnown RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 GYS2P54840 703 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 DNM1Q05193 864 aaKnown RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 ADALQ6DHV7 355 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 ANKRD23Q86SG2 305 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 ZKSCAN4Q969J2 545 aaPredicted RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 MEIS3Q99687 375 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 NAA15Q9BXJ9 866 aaKnown RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 HPCAL4Q9UM19 191 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 LOC102724159A0A0B4J2E5 919 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 CCDC69A6NI79 296 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 FAM177BA6PVY3 158 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 H0YGN5 161 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 IRF6O14896 467 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 ADCY2Q08462 1091 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 PWP2Q15269 919 aaKnown RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 LONRF2Q1L5Z9 754 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 SPDYAQ5MJ70 313 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 SRGAP1Q7Z6B7 1085 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 ZNF483Q8TF39 744 aaPredicted RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 TCP11Q8WWU5 503 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 MOV10L1Q9BXT6 1211 aaKnown RBP5.6□□□□□ -1.51
ABCA8-204ENST00000541225 ATP6V0A4Q9HBG4 840 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 NFS1Q9Y697 457 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 STK36Q9NRP7 1315 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 STRCQ7RTU9 1775 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 FAM160A1Q05DH4 1040 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 ADCK5Q3MIX3 580 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 HSP90AB3PQ58FF7 597 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 NBPF14Q5TI25 921 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 DAB2IPQ5VWQ8 1189 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 NEUROD6Q96NK8 337 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 CLIC6Q96NY7 704 aa5.6□□□□□ -1.51
ABCA8-204ENST00000541225 PNMA6EA0A0J9YXQ4 647 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 LRRIQ3A6PVS8 624 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 STRNO43815 780 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 DNAJC8O75937 253 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 YEATS4O95619 227 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 NBPF7P0C2Y1 421 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 IRX1P78414 480 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 PTPN14Q15678 1187 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 PABPC1LQ4VXU2 614 aaKnown RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 GBP6Q6ZN66 633 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 KRBA2Q6ZNG9 492 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 CCDC91Q7Z6B0 441 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 ALDH16A1Q8IZ83 802 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 SMCR8Q8TEV9 937 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 L3MBTL3Q96JM7 780 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 VCPKMTQ9H867 229 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 SLC12A4Q9UP95 1085 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 COL4A4P53420 1690 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 ARHGAP6O43182 974 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 PPP6R2O75170 966 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 FDPSP14324 419 aaKnown RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 RFX5P48382 616 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 CD151P48509 253 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 NLRP12P59046 1061 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 RABL6Q3YEC7 729 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 TMED8Q6PL24 325 aaPredicted RBP5.59□□□□□ -1.51
ABCA8-204ENST00000541225 SH3TC2Q8TF17 1288 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 ACSBG1Q96GR2 724 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 NUP62CLQ9H1M0 184 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 ATP8A2Q9NTI2 1148 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 CLIP2Q9UDT6 1046 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 TBC1D2BQ9UPU7 963 aa5.59□□□□□ -1.51
ABCA8-204ENST00000541225 NUP98P52948 1817 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 CES2O00748 559 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 TRIM37O94972 964 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 GCFC2P16383 781 aaKnown RBP5.59□□□□□ -1.52
ABCA8-204ENST00000541225 BEND3Q5T5X7 828 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 TTLL5Q6EMB2 1281 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 ARHGAP27Q6ZUM4 889 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 ERC1Q8IUD2 1116 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 MMGT1Q8N4V1 131 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.59□□□□□ -1.521e-6■■■■■ 47.2
ABCA8-204ENST00000541225 NECTIN2Q92692 538 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 SETDB2Q96T68 719 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.59□□□□□ -1.52
ABCA8-204ENST00000541225 FAM107BQ9H098 131 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 SUFUQ9UMX1 484 aa5.59□□□□□ -1.52
ABCA8-204ENST00000541225 FESP07332 822 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms