RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 CCDC42Q96M95 316 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 CSADQ9Y600 493 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 CTAGE15A4D2H0 777 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 CTAGE8P0CG41 777 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 ARHGAP27Q6ZUM4 889 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 CTAGE6Q86UF2 777 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 CTAGE4Q8IX94 777 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 RYBPQ8N488 228 aaPredicted RBP11.21□□□□□ -0.62
TRERF1-205ENST00000541110 NOX5Q96PH1 765 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.62
TRERF1-205ENST00000541110 AK9Q5TCS8 1911 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 ZNF165P49910 485 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 LRRC43Q8N309 656 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 WHAMMQ8TF30 809 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 ANKRD2Q9GZV1 360 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 CHPF2Q9P2E5 772 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 ERICH3Q5RHP9 1530 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 PDE1CQ14123 709 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-205ENST00000541110 SPATA17Q96L03 361 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 TRIM56Q9BRZ2 755 aaKnown RBP11.2□□□□□ -0.62
TRERF1-205ENST00000541110 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-205ENST00000541110 CALUO43852 315 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-205ENST00000541110 KRT83P78385 493 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 CEP57Q86XR8 500 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 GUCA1BQ9UMX6 200 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 BZW2Q9Y6E2 419 aaKnown RBP11.2□□□□□ -0.62
TRERF1-205ENST00000541110 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 PRR16Q569H4 304 aa11.2□□□□□ -0.62
TRERF1-205ENST00000541110 CDCA7Q9BWT1 371 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-205ENST00000541110 KRT86O43790 486 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 GNAT2P19087 354 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 LETM2Q2VYF4 491 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 RILPL1Q5EBL4 403 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 FYB2Q5VWT5 728 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 CNBD1Q8NA66 436 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 SAMD15Q9P1V8 674 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 ZFYP08048 801 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-205ENST00000541110 TNFAIP3P21580 790 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 SND1Q7KZF4 910 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRERF1-205ENST00000541110 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 NIM1KQ8IY84 436 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-205ENST00000541110 ARHGEF35A5YM69 484 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 CAPN9O14815 690 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 XPAP23025 273 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-205ENST00000541110 MAP7Q14244 749 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 DCUN1D2Q6PH85 259 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 NCOA2Q15596 1464 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 PIK3R4Q99570 1358 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-205ENST00000541110 ATP5DP30049 168 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 KRT33BQ14525 404 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 FAM170AA1A519 330 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 CETN3O15182 167 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 STX17P56962 302 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 SV2BQ7L1I2 683 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 LMCD1Q9NZU5 365 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 EXOC7Q9UPT5 735 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 RXRAP19793 462 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 RFC1P35251 1148 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-205ENST00000541110 XAGE3Q8WTP9 111 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 NKIRAS1Q9NYS0 192 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 RSPH14Q9UHP6 348 aa11.19□□□□□ -0.62
TRERF1-205ENST00000541110 RNASE9P60153 205 aaKnown RBP11.18□□□□□ -0.62
TRERF1-205ENST00000541110 UTP11Q9Y3A2 253 aaKnown RBP11.18□□□□□ -0.62
TRERF1-205ENST00000541110 ZNF131P52739 623 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 ANO6Q4KMQ2 910 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 GANCQ8TET4 914 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 INPP1P49441 399 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 NCAPH2Q6IBW4 605 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 GIMAP6Q6P9H5 292 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 ESPNB1AK53 854 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 YARSP54577 528 aaKnown RBP11.18□□□□□ -0.62
TRERF1-205ENST00000541110 P4HA1P13674 534 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 KIF11P52732 1056 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 ABI1Q8IZP0 508 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 WDR66Q8TBY9 1149 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
TRERF1-205ENST00000541110 TRPC6Q9Y210 931 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 TRIM75PA6NK02 468 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 TRAF5O00463 557 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 ATP11AP98196 1134 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 CEP128Q6ZU80 1094 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 POMGNT1Q8WZA1 660 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 PAG1Q9NWQ8 432 aa11.18□□□□□ -0.62
TRERF1-205ENST00000541110 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
TRERF1-205ENST00000541110 NEDD9Q14511 834 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 KRT81Q14533 505 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 CTNND2Q9UQB3 1225 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 CCDC94Q9BW85 323 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 ARFGAP3Q9NP61 516 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms