RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 TMTC2Q8N394 836 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 LCORLQ8N3X6 602 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 ZBTB21Q9ULJ3 1066 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 CLRN2A0PK11 232 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 EIF5P55010 431 aaKnown RBP10.97□□□□□ -0.65
TTC39C-203ENST00000540918 STIM1Q13586 685 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 JAKMIP3Q5VZ66 844 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 PIK3AP1Q6ZUJ8 805 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 DIS3L2Q8IYB7 885 aaKnown RBP10.97□□□□□ -0.65
TTC39C-203ENST00000540918 MAP4K1Q92918 833 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 IL25Q9H293 177 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 PRDX5P30044 214 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 PPARAQ07869 468 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 AKNAD1Q5T1N1 836 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 CPXCR1Q8N123 301 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 MNS1Q8NEH6 495 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 GJD4Q96KN9 370 aaPredicted RBP10.97□□□□□ -0.65
TTC39C-203ENST00000540918 AIFM3Q96NN9 605 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
TTC39C-203ENST00000540918 USP40Q9NVE5 1235 aa10.97□□□□□ -0.65
TTC39C-203ENST00000540918 ITPK1Q13572 414 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 WDR66Q8TBY9 1149 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 MRPS27Q92552 414 aaKnown RBP10.96□□□□□ -0.65
TTC39C-203ENST00000540918 INTS4Q96HW7 963 aaKnown RBP10.96□□□□□ -0.65
TTC39C-203ENST00000540918 MMRN2Q9H8L6 949 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 TCP11L1Q9NUJ3 509 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 DDX19AQ9NUU7 478 aaKnown RBP10.96□□□□□ -0.65
TTC39C-203ENST00000540918 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 RAD17O75943 681 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 SKIDA1Q1XH10 827 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 EYA3Q99504 573 aa10.96□□□□□ -0.65
TTC39C-203ENST00000540918 PREX1Q8TCU6 1659 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 TRIM75PA6NK02 468 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 PATL2C9JE40 543 aaKnown RBP10.96□□□□□ -0.66
TTC39C-203ENST00000540918 ZBTB7AO95365 584 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 CALM1P0DP23 149 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 CALM2P0DP24 149 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 CALM3P0DP25 149 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 PDIA6Q15084 440 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 NOM1Q5C9Z4 860 aaKnown RBP10.96□□□□□ -0.66
TTC39C-203ENST00000540918 LRRC47Q8N1G4 583 aaKnown RBP10.96□□□□□ -0.66
TTC39C-203ENST00000540918 AOPEPQ8N6M6 819 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 DYNLL2Q96FJ2 89 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 HDAC9Q9UKV0 1011 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 AOX1Q06278 1338 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 AGLP35573 1532 aa10.96□□□□□ -0.66
TTC39C-203ENST00000540918 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 A0A0U1RQG5 324 aaPredicted RBP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 USH1GQ495M9 461 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 CCDC178Q5BJE1 867 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 LRSAM1Q6UWE0 723 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 TMC6Q7Z403 805 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 HOMER2Q9NSB8 354 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 FRMPD2Q68DX3 1309 aaPredicted RBP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 BAG6P46379 1132 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 CT47A1Q5JQC4 288 aaPredicted RBP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 KRT40Q6A162 431 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 C16orf45Q96MC5 204 aaPredicted RBP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 DEF6Q9H4E7 631 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 MATR3P43243 847 aaKnown RBP eCLIP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 RAD51AP2Q09MP3 1159 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 SMARCE1Q969G3 411 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 EEF2KMTQ96G04 330 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
TTC39C-203ENST00000540918 DIP2AQ14689 1571 aa10.95□□□□□ -0.66
TTC39C-203ENST00000540918 CYP2E1P05181 493 aaPredicted RBP10.94□□□□□ -0.66
TTC39C-203ENST00000540918 USP17L8P0C7I0 530 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 SCRN1Q12765 414 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 TCERG1LQ5VWI1 586 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 CUL5Q93034 780 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 RBSNQ9H1K0 784 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 TMEM63CQ9P1W3 806 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 RIMS1Q86UR5 1692 aaKnown RBP10.94□□□□□ -0.66
TTC39C-203ENST00000540918 TNKSO95271 1327 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 FAM196BA6NMK8 535 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
TTC39C-203ENST00000540918 BTDP43251 543 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 HSP90AA2PQ14568 343 aaPredicted RBP10.94□□□□□ -0.66
TTC39C-203ENST00000540918 ZMYM1Q5SVZ6 1142 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 TTC6Q86TZ1 520 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.66
TTC39C-203ENST00000540918 FOXO4P98177 505 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.94□□□□□ -0.66
TTC39C-203ENST00000540918 CPVLQ9H3G5 476 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 NRXN1Q9ULB1 1477 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 TYRO3Q06418 890 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 PTF1AQ7RTS3 328 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 DSCC1Q9BVC3 393 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 TAF6LQ9Y6J9 622 aa10.94□□□□□ -0.66
TTC39C-203ENST00000540918 BTBD18B2RXH4 712 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 SFPQP23246 707 aaKnown RBP eCLIP10.93□□□□□ -0.66
TTC39C-203ENST00000540918 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms