RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 MAP2P11137 1827 aaKnown RBP10.02□□□□□ -0.8
DDB1-217ENST00000540166 PNMA6EA0A0J9YXQ4 647 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 H0YHG0 523 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 UFL1O94874 794 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 ATP8B2P98198 1209 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 DCPSQ96C86 337 aaKnown RBP10.02□□□□□ -0.81
DDB1-217ENST00000540166 PDRG1Q9NUG6 133 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 DDNO94850 711 aaPredicted RBP10.02□□□□□ -0.81
DDB1-217ENST00000540166 TM4SF1P30408 202 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 CLCN6P51797 869 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 SMC1AQ14683 1233 aaKnown RBP10.02□□□□□ -0.81
DDB1-217ENST00000540166 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 BRMS1Q9HCU9 246 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 GEMIN8Q9NWZ8 242 aaKnown RBP10.02□□□□□ -0.81
DDB1-217ENST00000540166 GGA1Q9UJY5 639 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 MAP3K2Q9Y2U5 619 aa10.02□□□□□ -0.81
DDB1-217ENST00000540166 ERLIN1O75477 346 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 TTLL5Q6EMB2 1281 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 TMC4Q7Z404 712 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 LRRC8AQ8IWT6 810 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 GOLGA5Q8TBA6 731 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.01□□□□□ -0.81
DDB1-217ENST00000540166 GLTPD2A6NH11 291 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 TULP2O00295 520 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 MYO1BO43795 1136 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 RAD17O75943 681 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 RDXP35241 583 aaKnown RBP10.01□□□□□ -0.81
DDB1-217ENST00000540166 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 SGIP1Q9BQI5 828 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 SRRTQ9BXP5 876 aaKnown RBP10.01□□□□□ -0.81
DDB1-217ENST00000540166 YY1AP1Q9H869 796 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 RAD50Q92878 1312 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 TRIM66O15016 1216 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 CPA1P15085 419 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 RPS8P62241 208 aaKnown RBP10.01□□□□□ -0.81
DDB1-217ENST00000540166 FKBP4Q02790 459 aaKnown RBP eCLIP10.01□□□□□ -0.81
DDB1-217ENST00000540166 IFIT5Q13325 482 aaKnown RBP10.01□□□□□ -0.81
DDB1-217ENST00000540166 SUSD4Q5VX71 490 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 PPM1EQ8WY54 764 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 TMOD2Q9NZR1 351 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 KIF20BQ96Q89 1820 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 ANKRD18BA2A2Z9 1011 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 PI4KAP2A4QPH2 592 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 MCM6Q14566 821 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 UBE3BQ7Z3V4 1068 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 PI4KAP1Q8N8J0 262 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 KIF1BPQ96EK5 621 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 ANO10Q9NW15 660 aa10.01□□□□□ -0.81
DDB1-217ENST00000540166 TUBB4AP04350 444 aa10□□□□□ -0.81
DDB1-217ENST00000540166 TDO2P48775 406 aa10□□□□□ -0.81
DDB1-217ENST00000540166 AK2P54819 239 aa10□□□□□ -0.81
DDB1-217ENST00000540166 STK3Q13188 491 aa10□□□□□ -0.81
DDB1-217ENST00000540166 TMC6Q7Z403 805 aa10□□□□□ -0.81
DDB1-217ENST00000540166 TMEM87AQ8NBN3 555 aa10□□□□□ -0.81
DDB1-217ENST00000540166 SH2B1Q9NRF2 756 aaPredicted RBP10□□□□□ -0.81
DDB1-217ENST00000540166 VPS18Q9P253 973 aa10□□□□□ -0.81
DDB1-217ENST00000540166 MKRN1Q9UHC7 482 aaKnown RBP10□□□□□ -0.81
DDB1-217ENST00000540166 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10□□□□□ -0.816e-7■□□□□ 10.3
DDB1-217ENST00000540166 HOXB7P09629 217 aa10□□□□□ -0.81
DDB1-217ENST00000540166 SRGNP10124 158 aa10□□□□□ -0.81
DDB1-217ENST00000540166 STX1AQ16623 288 aa10□□□□□ -0.81
DDB1-217ENST00000540166 FAM208AQ9UK61 1670 aaKnown RBP10□□□□□ -0.81
DDB1-217ENST00000540166 ELP1O95163 1332 aa10□□□□□ -0.81
DDB1-217ENST00000540166 EVCP57679 992 aa10□□□□□ -0.81
DDB1-217ENST00000540166 AMIGO3Q86WK7 504 aa10□□□□□ -0.81
DDB1-217ENST00000540166 ANKRD20A12PQ8NF67 263 aa10□□□□□ -0.81
DDB1-217ENST00000540166 GIMAP7Q8NHV1 300 aa10□□□□□ -0.81
DDB1-217ENST00000540166 NCAPGQ9BPX3 1015 aa10□□□□□ -0.81
DDB1-217ENST00000540166 MRVI1Q9Y6F6 885 aa10□□□□□ -0.81
DDB1-217ENST00000540166 FOSBP53539 338 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 MICALL1Q8N3F8 863 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 CCDC150Q8NCX0 1101 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 NECAB1Q8N987 351 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 ERCC4Q92889 916 aaPredicted RBP9.99□□□□□ -0.81
DDB1-217ENST00000540166 RAB11FIP3O75154 756 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 EPHX2P34913 555 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 JAKMIP3Q5VZ66 844 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 CHADLQ6NUI6 762 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 FAM107BQ9H098 131 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 OSBPL3Q9H4L5 887 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 CFAP45Q9UL16 551 aa9.99□□□□□ -0.81
DDB1-217ENST00000540166 NBPF26B4DH59 902 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 ZSCAN12O43309 604 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 LIG1P18858 919 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 ECE1P42892 770 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 G3BP1Q13283 466 aaKnown RBP eCLIP9.98□□□□□ -0.814e-8■■□□□ 14.2
DDB1-217ENST00000540166 E2F4Q16254 413 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
DDB1-217ENST00000540166 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 PDILTQ8N807 584 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 SMARCE1Q969G3 411 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 CARD6Q9BX69 1037 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 CTAGE5O15320 804 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 PDE8AO60658 829 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 GYS2P54840 703 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 BTAF1O14981 1849 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 GLRX3O76003 335 aaKnown RBP9.98□□□□□ -0.81
DDB1-217ENST00000540166 PSMA5P28066 241 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms