RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 C4BP0C0L5 1744 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 POTEB2H3BUK9 544 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 PRC1O43663 620 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 LONRF2Q1L5Z9 754 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 SHC4Q6S5L8 630 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 CCDC34Q96HJ3 373 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 TRERF1Q96PN7 1200 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 ADAM21Q9UKJ8 722 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 SPECC1LQ69YQ0 1117 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 LRP10Q7Z4F1 713 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 MB21D2Q8IYB1 491 aaPredicted RBP20.2■□□□□ 0.82
RAB40C-205ENST00000539661 EPC1Q9H2F5 836 aa20.2■□□□□ 0.82
RAB40C-205ENST00000539661 MARCKSP29966 332 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-205ENST00000539661 CASP7P55210 303 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 PNOCQ13519 176 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 CCDC102BQ68D86 513 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 FAM177A1Q8N128 213 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-205ENST00000539661 TC2NQ8N9U0 490 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 NFATC2IPQ8NCF5 419 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 NEUROD6Q96NK8 337 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 MAP3K15Q6ZN16 1313 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 NWD2Q9ULI1 1742 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 TUBB2AQ13885 445 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 PTPAQ15257 358 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 CCDC191Q8NCU4 936 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 TUBB2BQ9BVA1 445 aa20.19■□□□□ 0.82
RAB40C-205ENST00000539661 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.19■□□□□ 0.82
RAB40C-205ENST00000539661 HOOK1Q9UJC3 728 aaKnown RBP20.19■□□□□ 0.82
RAB40C-205ENST00000539661 A0A087WZG4 1122 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 M0R2C6 588 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 CUTAO60888 179 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 PDE4CQ08493 712 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 TTLL5Q6EMB2 1281 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 ATG9AQ7Z3C6 839 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 GPHNQ9NQX3 736 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-205ENST00000539661 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
RAB40C-205ENST00000539661 IL15P40933 162 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-205ENST00000539661 GOLGA8FQ08AF8 430 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 GOLGA8DPQ0D2H9 430 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 METTL16Q86W50 562 aaKnown RBP20.18■□□□□ 0.82
RAB40C-205ENST00000539661 NCOA7Q8NI08 942 aa20.18■□□□□ 0.82
RAB40C-205ENST00000539661 TOGARAM2Q6ZUX3 1019 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 DHX58Q96C10 678 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 EFCC1Q9HA90 598 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 DACH1Q9UI36 760 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 ZFYP08048 801 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-205ENST00000539661 ACTN2P35609 894 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 USP5P45974 858 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 LMBR1LQ6UX01 489 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 SRGAP1Q7Z6B7 1085 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 SCN11AQ9UI33 1791 aa20.17■□□□□ 0.82
RAB40C-205ENST00000539661 CDKL5O76039 1030 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 ZNF18P17022 549 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 CNNM3Q8NE01 707 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 MAP3K14Q99558 947 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 CPDO75976 1380 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 MYO1CO00159 1063 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 IVLP07476 585 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 VPS37DQ86XT2 251 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 PDILTQ8N807 584 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 CEP112Q8N8E3 955 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 PCDHA5Q9Y5H7 936 aa20.16■□□□□ 0.82
RAB40C-205ENST00000539661 KRT28Q7Z3Y7 464 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 RALYLQ86SE5 291 aaKnown RBP20.15■□□□□ 0.82
RAB40C-205ENST00000539661 ENOX1Q8TC92 643 aaKnown RBP20.15■□□□□ 0.82
RAB40C-205ENST00000539661 CCDC12Q8WUD4 166 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-205ENST00000539661 GJB4Q9NTQ9 266 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 RAB21Q9UL25 225 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 ZMYM6O95789 1325 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 CCDC175P0C221 793 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 ANTXR2P58335 489 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 CHMP4BP1P59074 171 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 CHRNA2Q15822 529 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 HDXQ7Z353 690 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 MLKLQ8NB16 471 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 ALG1Q9BT22 464 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 KCNH3Q9ULD8 1083 aa20.15■□□□□ 0.82
RAB40C-205ENST00000539661 H3BQF6 201 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 ERLIN1O75477 346 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 EIF3JO75822 258 aaKnown RBP20.14■□□□□ 0.82
RAB40C-205ENST00000539661 LMAN1P49257 510 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 FOXO4P98177 505 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 LONRF3Q496Y0 759 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 SRLQ86TD4 932 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 FOXP4Q8IVH2 680 aaPredicted RBP20.14■□□□□ 0.82
RAB40C-205ENST00000539661 MSANTD4Q8NCY6 345 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 PANX2Q96RD6 677 aa20.14■□□□□ 0.82
RAB40C-205ENST00000539661 NAA15Q9BXJ9 866 aaKnown RBP20.14■□□□□ 0.82
RAB40C-205ENST00000539661 RPS6KA5O75582 802 aa20.14■□□□□ 0.81
RAB40C-205ENST00000539661 TIMM10P62072 90 aa20.14■□□□□ 0.81
RAB40C-205ENST00000539661 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
RAB40C-205ENST00000539661 CCDC9Q9Y3X0 531 aaKnown RBP20.14■□□□□ 0.81
RAB40C-205ENST00000539661 SNRPA1P09661 255 aaKnown RBP20.13■□□□□ 0.81
RAB40C-205ENST00000539661 MDM2Q00987 491 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-205ENST00000539661 PDE4BQ07343 736 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms