RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CCDC129Q6ZRS4 1044 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 ZNF384Q8TF68 577 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 JDP2Q8WYK2 163 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 ZNRF3Q9ULT6 936 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
LEMD3-202ENST00000539442 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
LEMD3-202ENST00000539442 YDJCA8MPS7 323 aa12.75□□□□□ -0.37
LEMD3-202ENST00000539442 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
LEMD3-202ENST00000539442 ANAPC15P60006 121 aa12.75□□□□□ -0.37
LEMD3-202ENST00000539442 PTH1RQ03431 593 aa12.75□□□□□ -0.37
LEMD3-202ENST00000539442 CHD4Q14839 1912 aa12.75□□□□□ -0.37
LEMD3-202ENST00000539442 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
LEMD3-202ENST00000539442 STRBPQ96SI9 672 aaKnown RBP12.75□□□□□ -0.37
LEMD3-202ENST00000539442 MYO5AQ9Y4I1 1855 aaKnown RBP12.75□□□□□ -0.37
LEMD3-202ENST00000539442 COL4A5P29400 1685 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 MROH7-TTC4A0A0A0MT08 1334 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 GAKO14976 1311 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 ZMYM6O95789 1325 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 MAGEB6P1A0A0J9YX57 407 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 MBD4O95243 580 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 RASSF7Q02833 373 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 GRIK5Q16478 980 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 ADGRA1Q86SQ6 560 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 IL17RAQ96F46 866 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 RIOK1Q9BRS2 568 aaKnown RBP12.74□□□□□ -0.37
LEMD3-202ENST00000539442 NOL10Q9BSC4 688 aaKnown RBP12.74□□□□□ -0.37
LEMD3-202ENST00000539442 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
LEMD3-202ENST00000539442 CCDC88AQ3V6T2 1871 aa12.74□□□□□ -0.37
LEMD3-202ENST00000539442 BAG3O95817 575 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 VIL1P09327 827 aaKnown RBP12.73□□□□□ -0.37
LEMD3-202ENST00000539442 PPP4CP60510 307 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 HDLBPQ00341 1268 aaKnown RBP12.73□□□□□ -0.37
LEMD3-202ENST00000539442 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 LCORLQ8N3X6 602 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 MIGA1Q8NAN2 632 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 KCNB2Q92953 911 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 ARMT1Q9H993 441 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 KCNQ5Q9NR82 932 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 CTNNA3Q9UI47 895 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 PSME4Q14997 1843 aa12.73□□□□□ -0.37
LEMD3-202ENST00000539442 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
LEMD3-202ENST00000539442 GPR75-ASB3A0A0A6YYF3 556 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 PATL2C9JE40 543 aaKnown RBP12.72□□□□□ -0.37
LEMD3-202ENST00000539442 PLCG2P16885 1265 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 ZKSCAN1P17029 563 aaPredicted RBP12.72□□□□□ -0.37
LEMD3-202ENST00000539442 LMNB1P20700 586 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 ALX1Q15699 326 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 VPS53Q5VIR6 699 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
LEMD3-202ENST00000539442 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 AGBL3Q8NEM8 1001 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 NACAP1Q9BZK3 213 aa12.72□□□□□ -0.37
LEMD3-202ENST00000539442 TTF2Q9UNY4 1162 aaKnown RBP12.72□□□□□ -0.37
LEMD3-202ENST00000539442 FZD9O00144 591 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 PSMD14O00487 310 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 FOXP2O15409 715 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 RAD17O75943 681 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.37
LEMD3-202ENST00000539442 BTDP43251 543 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 MMP14P50281 582 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 TNIP1Q15025 636 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 CIAPIN1Q6FI81 312 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 GIMAP6Q6P9H5 292 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 HHIPL2Q6UWX4 724 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 TEKT1Q969V4 418 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 CRNKL1Q9BZJ0 848 aaKnown RBP12.71□□□□□ -0.37
LEMD3-202ENST00000539442 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
LEMD3-202ENST00000539442 AATFQ9NY61 560 aaKnown RBP eCLIP12.71□□□□□ -0.37
LEMD3-202ENST00000539442 SERPINA10Q9UK55 444 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 SLC4A4Q9Y6R1 1079 aa12.71□□□□□ -0.37
LEMD3-202ENST00000539442 GSG1L2A8MUP6 293 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 SLC27A2O14975 620 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 APPP05067 770 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 YBX3P16989 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
LEMD3-202ENST00000539442 PRELPP51888 382 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 EIF6P56537 245 aaKnown RBP12.7□□□□□ -0.38
LEMD3-202ENST00000539442 DYNLL1P63167 89 aaKnown RBP12.7□□□□□ -0.38
LEMD3-202ENST00000539442 CXCL9Q07325 125 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 KRT32Q14532 448 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 RABEP1Q15276 862 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 GMLQ99445 158 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 KIF2CQ99661 725 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 MXD3Q9BW11 206 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 DAGLAQ9Y4D2 1042 aa12.7□□□□□ -0.38
LEMD3-202ENST00000539442 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
LEMD3-202ENST00000539442 FGAP02671 866 aa12.69□□□□□ -0.38
LEMD3-202ENST00000539442 RPS12P25398 132 aaKnown RBP12.69□□□□□ -0.38
LEMD3-202ENST00000539442 CRKP46108 304 aa12.69□□□□□ -0.38
LEMD3-202ENST00000539442 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms