RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 DLGAP3O95886 979 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 BCRP11274 1271 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 LMNB1P20700 586 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 AMPD1P23109 780 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 MAOBP27338 520 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 SOX9P48436 509 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 C19orf57Q0VDD7 668 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 GPBAR1Q8TDU6 330 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 USP26Q9BXU7 913 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 PIF1Q9H611 641 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 CCDC86Q9H6F5 360 aaKnown RBP4.85□□□□□ -1.63
SNHG1-210ENST00000539303 BRMS1Q9HCU9 246 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 CYP8B1Q9UNU6 501 aa4.85□□□□□ -1.63
SNHG1-210ENST00000539303 POLR3KQ9Y2Y1 108 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-210ENST00000539303 ZNF862O60290 1169 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 SSBP05455 408 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNHG1-210ENST00000539303 LIG1P18858 919 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 MCM4P33991 863 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 DGKGP49619 791 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 PIP4K2BP78356 416 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 CLCQ05315 142 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 INPP5AQ14642 412 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 POU4F3Q15319 338 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 CCDC144BQ3MJ40 725 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 FOXD4L6Q3SYB3 417 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-210ENST00000539303 FOXD4L3Q6VB84 417 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-210ENST00000539303 GK5Q6ZS86 529 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 ILDR2Q71H61 639 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 REC114Q7Z4M0 266 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 SLITRK4Q8IW52 837 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 FAM169BQ8N8A8 192 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 UBASH3BQ8TF42 649 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 HNRNPLLQ8WVV9 542 aaKnown RBP4.84□□□□□ -1.63
SNHG1-210ENST00000539303 ZNF775Q96BV0 537 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-210ENST00000539303 ANAPC16Q96DE5 110 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 SEC16BQ96JE7 1060 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 LRRC3Q9BY71 257 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 SOX17Q9H6I2 414 aaPredicted RBP4.84□□□□□ -1.63
SNHG1-210ENST00000539303 CACNA2D2Q9NY47 1150 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 SAMM50Q9Y512 469 aa4.84□□□□□ -1.63
SNHG1-210ENST00000539303 STK10O94804 968 aaKnown RBP4.83□□□□□ -1.64
SNHG1-210ENST00000539303 TRIM37O94972 964 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 WISP1O95388 367 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 SNRPNP63162 240 aaKnown RBP4.83□□□□□ -1.64
SNHG1-210ENST00000539303 RBL2Q08999 1139 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 AP3B2Q13367 1082 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 MPP2Q14168 576 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 LRRC14Q15048 493 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 ZNF385CQ66K41 422 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-210ENST00000539303 GIMAP6Q6P9H5 292 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 LRFN4Q6PJG9 635 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 TREML4Q6UXN2 200 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 CCDC84Q86UT8 332 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-210ENST00000539303 TRIM11Q96F44 468 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 ACSBG1Q96GR2 724 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 SHDQ96IW2 340 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 CORO1BQ9BR76 489 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 EMILIN2Q9BXX0 1053 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 ANTXR1Q9H6X2 564 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 PCDHA4Q9UN74 947 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 CORINQ9Y5Q5 1042 aa4.83□□□□□ -1.64
SNHG1-210ENST00000539303 LOC100289279A0A1B0GTE1 492 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 FAM229AH3BQW9 127 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 BPNT1O95861 308 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 PDE3AQ14432 1141 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 WIPI1Q5MNZ9 446 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-210ENST00000539303 FBXW10Q5XX13 1052 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 FAM117BQ6P1L5 589 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 ANKS3Q6ZW76 656 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 CACTIN-AS1Q8N1I8 211 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 CPLX3Q8WVH0 158 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 ARMC5Q96C12 935 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 PLPPR2Q96GM1 343 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 SRRTQ9BXP5 876 aaKnown RBP4.82□□□□□ -1.64
SNHG1-210ENST00000539303 RRAGCQ9HB90 399 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 OSGEPQ9NPF4 335 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 PRDM6Q9NQX0 595 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 PCDHB14Q9Y5E9 798 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 CSADQ9Y600 493 aa4.82□□□□□ -1.64
SNHG1-210ENST00000539303 DCDC2CA8MYV0 355 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 DLL1O00548 723 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 SMAD7O15105 426 aaKnown RBP4.81□□□□□ -1.64
SNHG1-210ENST00000539303 SMARCA5O60264 1052 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-210ENST00000539303 WFS1O76024 890 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 CYP11A1P05108 521 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 ARL4DP49703 201 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 RPL6Q02878 288 aaKnown RBP4.81□□□□□ -1.64
SNHG1-210ENST00000539303 BMS1Q14692 1282 aaKnown RBP4.81□□□□□ -1.64
SNHG1-210ENST00000539303 SUZ12Q15022 739 aaKnown RBP4.81□□□□□ -1.64
SNHG1-210ENST00000539303 CWF19L2Q2TBE0 894 aaKnown RBP4.81□□□□□ -1.64
SNHG1-210ENST00000539303 RUFY4Q6ZNE9 571 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 DDX54Q8TDD1 881 aaKnown RBP4.81□□□□□ -1.64
SNHG1-210ENST00000539303 SPATA32Q96LK8 384 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 LRRC4BQ9NT99 713 aa4.81□□□□□ -1.64
SNHG1-210ENST00000539303 ROBO2Q9HCK4 1378 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 A0A0A0MRY4 1105 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 GFRA2O00451 464 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 DNAJA2O60884 412 aa4.8□□□□□ -1.64
SNHG1-210ENST00000539303 CD68P34810 354 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-210ENST00000539303 SERINC3Q13530 473 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms