RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PRMT6Q96LA8 375 aaPredicted RBP10.41□□□□□ -0.74
GGA3-202ENST00000538886 UTYO14607 1347 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 TSPY2A6NKD2 308 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 HIP1O00291 1037 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 TOGARAM1Q9Y4F4 1720 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 GLTPD2A6NH11 291 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 VGLL3A8MV65 326 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 ZNF213O14771 459 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 GPAA1O43292 621 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 REC8O95072 547 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 CELF2O95319 508 aaKnown RBP10.41□□□□□ -0.74
GGA3-202ENST00000538886 ATP5JP18859 108 aa10.41□□□□□ -0.74
GGA3-202ENST00000538886 LARP6Q9BRS8 491 aaKnown RBP10.41□□□□□ -0.74
GGA3-202ENST00000538886 YDJCA8MPS7 323 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 RASA3Q14644 834 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 CHST3Q7LGC8 479 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 TCEANC2Q96MN5 208 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 NHSQ6T4R5 1651 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 CYP2D7A0A087X1C5 515 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 USP17L12C9JPN9 530 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 USP17L21D6R901 530 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 RGL2O15211 777 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 PLCG2P16885 1265 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 FOSBP53539 338 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 GRIK5Q16478 980 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 TTC22Q5TAA0 569 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 RNF20Q5VTR2 975 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 GPC2Q8N158 579 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 KBTBD3Q8NAB2 608 aa10.4□□□□□ -0.74
GGA3-202ENST00000538886 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.75
GGA3-202ENST00000538886 POTEIP0CG38 1075 aa10.4□□□□□ -0.75
GGA3-202ENST00000538886 POTEJP0CG39 1038 aa10.4□□□□□ -0.75
GGA3-202ENST00000538886 TMEM39BQ9GZU3 492 aa10.4□□□□□ -0.75
GGA3-202ENST00000538886 CSADQ9Y600 493 aa10.4□□□□□ -0.75
GGA3-202ENST00000538886 VPS53Q5VIR6 699 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 FBXO33Q7Z6M2 555 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 ZKSCAN3Q9BRR0 538 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.39□□□□□ -0.75
GGA3-202ENST00000538886 PICK1Q9NRD5 415 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
GGA3-202ENST00000538886 TTC41PQ6P2S7 1318 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 ADM5C9JUS6 153 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 TRAF5O00463 557 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 CLCN1P35523 988 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 IMMTQ16891 758 aaKnown RBP10.39□□□□□ -0.75
GGA3-202ENST00000538886 MCMDC2Q4G0Z9 681 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 SYNE3Q6ZMZ3 975 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 PNMA8AQ86V59 439 aaPredicted RBP10.39□□□□□ -0.75
GGA3-202ENST00000538886 TDRD7Q8NHU6 1098 aaKnown RBP10.39□□□□□ -0.75
GGA3-202ENST00000538886 TRPM4Q8TD43 1214 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 GDF11O95390 407 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 MYCP01106 439 aaPredicted RBP10.39□□□□□ -0.75
GGA3-202ENST00000538886 HTRA3P83110 453 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 SH3RF3Q8TEJ3 882 aaPredicted RBP10.39□□□□□ -0.75
GGA3-202ENST00000538886 UBAC1Q9BSL1 405 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 DEFB129Q9H1M3 183 aa10.39□□□□□ -0.75
GGA3-202ENST00000538886 TPM2P07951 284 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 ZFYP08048 801 aaPredicted RBP10.38□□□□□ -0.75
GGA3-202ENST00000538886 FMR1Q06787 632 aaKnown RBP eCLIP10.38□□□□□ -0.75
GGA3-202ENST00000538886 PUS7LQ9H0K6 701 aaKnown RBP10.38□□□□□ -0.75
GGA3-202ENST00000538886 ADARB2Q9NS39 739 aaKnown RBP10.38□□□□□ -0.75
GGA3-202ENST00000538886 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 EGFRP00533 1210 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 HUNKP57058 714 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 C2orf69Q8N8R5 385 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 HAUS7Q99871 368 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 UPF3BQ9BZI7 483 aaKnown RBP10.38□□□□□ -0.75
GGA3-202ENST00000538886 VAT1LQ9HCJ6 419 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 ASTN2O75129 1339 aaPredicted RBP10.38□□□□□ -0.75
GGA3-202ENST00000538886 TSPY3P0CV98 308 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 TSPY8P0CW00 308 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 STK3Q13188 491 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 TTC6Q86TZ1 520 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 LCORLQ8N3X6 602 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 PANK2Q9BZ23 570 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 GPRC5DQ9NZD1 345 aa10.38□□□□□ -0.75
GGA3-202ENST00000538886 UBE2Q2LH0YL09 131 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 WDHD1O75717 1129 aaPredicted RBP10.37□□□□□ -0.75
GGA3-202ENST00000538886 CCDC96Q2M329 555 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 CCDC84Q86UT8 332 aaPredicted RBP10.37□□□□□ -0.75
GGA3-202ENST00000538886 CCDC144CPQ8IYA2 1237 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 APPBP2Q92624 585 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 MYO3BQ8WXR4 1341 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 PLS1Q14651 629 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 SUPT20HL1Q3ZLR7 823 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 CERS5Q8N5B7 392 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 SLC10A4Q96EP9 437 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 GPR108Q9NPR9 543 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 DAGLAQ9Y4D2 1042 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 PXDNLA1KZ92 1463 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 ESPNB1AK53 854 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 WNT10BO00744 389 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 SEMA3EO15041 775 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 SLURP2P0DP57 97 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 PDE4BQ07343 736 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 NFIAQ12857 509 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 FAM47AQ5JRC9 791 aa10.37□□□□□ -0.75
GGA3-202ENST00000538886 DACT2Q5SW24 774 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms