RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 CCDC194A0A1B0GVG4 234 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 SPTLC2O15270 562 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 CTDNEP1O95476 244 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 USP5P45974 858 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 EIF4A1P60842 406 aaKnown RBP10.34□□□□□ -0.75
SNHG1-209ENST00000538654 CEP112Q8N8E3 955 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 ZNF274Q96GC6 653 aaPredicted RBP10.34□□□□□ -0.75
SNHG1-209ENST00000538654 BAG1Q99933 345 aaPredicted RBP10.34□□□□□ -0.75
SNHG1-209ENST00000538654 GBP3Q9H0R5 595 aa10.34□□□□□ -0.75
SNHG1-209ENST00000538654 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
SNHG1-209ENST00000538654 FANCGO15287 622 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 CMA1P23946 247 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 KCNA1Q09470 495 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 OLFM4Q6UX06 510 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 AGXT2Q9BYV1 514 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 SIL1Q9H173 461 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 VPS18Q9P253 973 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 H3BQF6 201 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 BIN1O00499 593 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 CYP21A2P08686 494 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 ATP5JP18859 108 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 GUCY2CP25092 1073 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 MCMDC2Q4G0Z9 681 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 HSP90B2PQ58FF3 399 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 SRGAP1Q7Z6B7 1085 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
SNHG1-209ENST00000538654 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
SNHG1-209ENST00000538654 JRKLQ9Y4A0 524 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 CARMIL3Q8ND23 1372 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 CEMIPQ8WUJ3 1361 aa10.33□□□□□ -0.76
SNHG1-209ENST00000538654 CHMP4BP1P59074 171 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 SYNE3Q6ZMZ3 975 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 TMEM139Q8IV31 216 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 WDR24Q96S15 920 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 DEF6Q9H4E7 631 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 TUBE1Q9UJT0 475 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 RAB21Q9UL25 225 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 UTYO14607 1347 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 NEDD4P46934 1319 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 FAM71BQ8TC56 605 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 EPC1Q9H2F5 836 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 MAP3K2Q9Y2U5 619 aa10.32□□□□□ -0.76
SNHG1-209ENST00000538654 GRM8O00222 908 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 ATP1A3P13637 1013 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 BEND6Q5SZJ8 279 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 MYCBPQ99417 103 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 HSD3B7Q9H2F3 369 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 PDE11AQ9HCR9 933 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 MED4Q9NPJ6 270 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 FAN1Q9Y2M0 1017 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 EIF3CLB5ME19 914 aaKnown RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 GYS2P54840 703 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 CORO7P57737 925 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 EXOSC10Q01780 885 aaKnown RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 TBX2Q13207 712 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 LARGE2Q8N3Y3 721 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 MSANTD4Q8NCY6 345 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 LINS1Q8NG48 757 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 CCDC12Q8WUD4 166 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 DHX58Q96C10 678 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 CALR3Q96L12 384 aaKnown RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 EIF3CQ99613 913 aaKnown RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 TLR7Q9NYK1 1049 aaKnown RBP10.31□□□□□ -0.76
SNHG1-209ENST00000538654 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 CCDC175P0C221 793 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 PFKFB1P16118 471 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 EFCAB13Q8IY85 973 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 JMYQ8N9B5 988 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 NCAPGQ9BPX3 1015 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 CLIC4Q9Y696 253 aa10.31□□□□□ -0.76
SNHG1-209ENST00000538654 COL15A1P39059 1388 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 SH3TC1Q8TE82 1336 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 CUTAO60888 179 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 DDX58O95786 925 aaKnown RBP10.3□□□□□ -0.76
SNHG1-209ENST00000538654 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
SNHG1-209ENST00000538654 SYKP43405 635 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
SNHG1-209ENST00000538654 GUCY1B3Q02153 619 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 MYBPC2Q14324 1141 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 C11orf96Q7Z7L8 435 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 FBXL16Q8N461 479 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 ATL2Q8NHH9 583 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 DPF2Q92785 391 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 C8orf76Q96K31 380 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 DSCC1Q9BVC3 393 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 LRRC2Q9BYS8 371 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 PRR12Q9ULL5 1215 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 AGLP35573 1532 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 ZNF609O15014 1411 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-209ENST00000538654 ATP2B1P20020 1258 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
SNHG1-209ENST00000538654 CCDC181Q5TID7 509 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 MYSM1Q5VVJ2 828 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 ANO1Q5XXA6 986 aa10.3□□□□□ -0.76
SNHG1-209ENST00000538654 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 1019.6 ms