RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 HTTP42858 3142 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 CCL15-CCL14A0A0B4J2E2 113 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 IPO8O15397 1037 aaKnown RBP10.74□□□□□ -0.69
DDB1-212ENST00000538470 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
DDB1-212ENST00000538470 LDHBP07195 334 aaKnown RBP10.74□□□□□ -0.69
DDB1-212ENST00000538470 PRDX5P30044 214 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 CACNB3P54284 484 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 CCL15Q16663 113 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 ERO1BQ86YB8 467 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 FAM151AQ8WW52 585 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 OTUD5Q96G74 571 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 ZNF341Q9BYN7 854 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 SNCAIPQ9Y6H5 919 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 KIAA0100Q14667 2235 aaKnown RBP10.74□□□□□ -0.69
DDB1-212ENST00000538470 RFX7Q2KHR2 1363 aa10.74□□□□□ -0.69
DDB1-212ENST00000538470 CETPP11597 493 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 PHKA1P46020 1223 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 SP3Q02447 781 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 PPIL2Q13356 520 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 ARHGEF6Q15052 776 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 TAF1CQ15572 869 aaPredicted RBP10.73□□□□□ -0.69
DDB1-212ENST00000538470 BRI3BPQ8WY22 251 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 PTPN18Q99952 460 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 ZFYVE28Q9HCC9 887 aa10.73□□□□□ -0.69
DDB1-212ENST00000538470 PA2G4Q9UQ80 394 aaKnown RBP10.73□□□□□ -0.69
DDB1-212ENST00000538470 SRGAP3O43295 1099 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 SNAPC2Q13487 334 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 MVPQ14764 893 aaKnown RBP10.72□□□□□ -0.69
DDB1-212ENST00000538470 DIXDC1Q155Q3 683 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 NOL9Q5SY16 702 aaKnown RBP10.72□□□□□ -0.69
DDB1-212ENST00000538470 CCDC102BQ68D86 513 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 SLF2Q8IX21 1173 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 CD99L2Q8TCZ2 262 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 EFCC1Q9HA90 598 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 AKAP2Q9Y2D5 859 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 GAKO14976 1311 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 PHIPQ8WWQ0 1821 aa10.72□□□□□ -0.69
DDB1-212ENST00000538470 ZSWIM8A7E2V4 1837 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 TRIM27P14373 513 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 PPATQ06203 517 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 RASGRF1Q13972 1273 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 FOCADQ5VW36 1801 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 CDC42EP5Q6NZY7 148 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 ATF7IPQ6VMQ6 1270 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
DDB1-212ENST00000538470 ATAD5Q96QE3 1844 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 ZNF112Q9UJU3 913 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 PTPN22Q9Y2R2 807 aa10.71□□□□□ -0.69
DDB1-212ENST00000538470 MGAMO43451 1857 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 COL2A1P02458 1487 aaPredicted RBP10.7□□□□□ -0.7
DDB1-212ENST00000538470 ATRNL1Q5VV63 1379 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 A0A1B0GUL7 405 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 IRF6O14896 467 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 SLC34A2O95436 690 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 GNAI2P04899 355 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 ADORA1P30542 326 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 NFIAQ12857 509 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 PRPF38BQ5VTL8 546 aaKnown RBP10.7□□□□□ -0.7
DDB1-212ENST00000538470 DIEXFQ68CQ4 756 aaKnown RBP10.7□□□□□ -0.7
DDB1-212ENST00000538470 SPTY2D1Q68D10 685 aaPredicted RBP10.7□□□□□ -0.7
DDB1-212ENST00000538470 FAM43AQ8N2R8 423 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 ZKSCAN4Q969J2 545 aaPredicted RBP10.7□□□□□ -0.7
DDB1-212ENST00000538470 ARMC5Q96C12 935 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 KCNH4Q9UQ05 1017 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 CDK5RAP2Q96SN8 1893 aa10.7□□□□□ -0.7
DDB1-212ENST00000538470 MROH7-TTC4A0A0A0MT08 1334 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 BTBD19C9JJ37 291 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 TLR2O60603 784 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 ENTPD3O75355 529 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 INPP5BP32019 993 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 TFCP2Q12800 502 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
DDB1-212ENST00000538470 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 USP40Q9NVE5 1235 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 LOC285556D6RIA3 1793 aa10.69□□□□□ -0.7
DDB1-212ENST00000538470 MAP4K4O95819 1239 aaPredicted RBP10.68□□□□□ -0.7
DDB1-212ENST00000538470 GNRH1P01148 92 aa10.68□□□□□ -0.7
DDB1-212ENST00000538470 TCP10Q12799 353 aa10.68□□□□□ -0.7
DDB1-212ENST00000538470 KIF22Q14807 665 aa10.68□□□□□ -0.7
DDB1-212ENST00000538470 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
DDB1-212ENST00000538470 MIGA2Q7L4E1 593 aa10.68□□□□□ -0.7
DDB1-212ENST00000538470 ANKRD23Q86SG2 305 aa10.68□□□□□ -0.7
DDB1-212ENST00000538470 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
DDB1-212ENST00000538470 ABCF2Q9UG63 623 aa10.68□□□□□ -0.7
DDB1-212ENST00000538470 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
DDB1-212ENST00000538470 ARID4AP29374 1257 aaPredicted RBP10.67□□□□□ -0.7
DDB1-212ENST00000538470 BTDP43251 543 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 RGS3P49796 1198 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 PRMT2P55345 433 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 TIMM10P62072 90 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 GSTO1P78417 241 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 LACTBP83111 547 aaPredicted RBP10.67□□□□□ -0.7
DDB1-212ENST00000538470 ERICH6Q7L0X2 663 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 GPR108Q9NPR9 543 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 SIPA1L1O43166 1804 aa10.67□□□□□ -0.7
DDB1-212ENST00000538470 CENPFP49454 3210 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms