RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 PTMAP06454 111 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 GYG1P46976 350 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 CPLX2Q6PUV4 134 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 ENGASEQ8NFI3 743 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 SCN7AQ01118 1682 aa13.32□□□□□ -0.28
SLC28A1-204ENST00000538177 ZBTB43O43298 467 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 CYP7A1P22680 504 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 GTF2E1P29083 439 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 CDC27P30260 824 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 NTRK3Q16288 839 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 MFSD6Q6ZSS7 791 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 LINC00301Q8NCQ3 95 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 GOLPH3LQ9H4A5 285 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 POLR3EQ9NVU0 708 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 A0A1W2PQ27 194 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 A0A1W2PQ64 194 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 A0A1W2PQD8 194 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 AP5Z1O43299 807 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 YEATS4O95619 227 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 ME1P48163 572 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 TDO2P48775 406 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 KIF23Q02241 960 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 CAVIN4Q5BKX8 364 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 SASS6Q6UVJ0 657 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 CCDC73Q6ZRK6 1079 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 FBXO33Q7Z6M2 555 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 MIGA1Q8NAN2 632 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 FAM84BQ96KN1 310 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 SETDB2Q96T68 719 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 PCDHA7Q9UN72 937 aa13.31□□□□□ -0.28
SLC28A1-204ENST00000538177 NID2Q14112 1375 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 WTIPA6NIX2 430 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 IFIT3O14879 490 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 OFD1O75665 1012 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 CAVIN2O95810 425 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 RPS8P62241 208 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 ANO6Q4KMQ2 910 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 ADALQ6DHV7 355 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 NFXL1Q6ZNB6 911 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 NLRP3Q96P20 1036 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 ALG1Q9BT22 464 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 IQSEC3Q9UPP2 1182 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 COL1A1P02452 1464 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 GOLGA8AA7E2F4 631 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 POLR3DP05423 398 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 ADGRA1Q86SQ6 560 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 MICU3Q86XE3 530 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 KCNG4Q8TDN1 519 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 RNF41Q9H4P4 317 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 ABCF2Q9UG63 623 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
SLC28A1-204ENST00000538177 MAGEB6P1A0A0J9YX57 407 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 SEMA3EO15041 775 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 GNPATO15228 680 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 ZPR1O75312 459 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 RXRAP19793 462 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 RIOK1Q9BRS2 568 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 RAI14Q9P0K7 980 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 USP21Q9UK80 565 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC28A1-204ENST00000538177 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 STK36Q9NRP7 1315 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 IARSP41252 1262 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 PPARAQ07869 468 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 STK38Q15208 465 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 LUZP1Q86V48 1076 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 TMTC2Q8N394 836 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 TAF1P21675 1872 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 BTAF1O14981 1849 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 CHD4Q14839 1912 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 SPATA31A6Q5VVP1 1343 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 ZBTB22O15209 634 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 SPTLC2O15270 562 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 RANBP6O60518 1105 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 KINO60870 393 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms