RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 LUZP1Q86V48 1076 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 FAM114A1Q8IWE2 563 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 TEX11Q8IYF3 940 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 ZSWIM4Q9H7M6 989 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 UFL1O94874 794 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 SPAG1Q07617 926 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 TCIRG1Q13488 830 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 TTLL7Q6ZT98 887 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 STXBP4Q6ZWJ1 553 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 EAF2Q96CJ1 260 aaPredicted RBP11.48□□□□□ -0.57
GGA3-201ENST00000537686 ANGEL1Q9UNK9 670 aaKnown RBP11.48□□□□□ -0.57
GGA3-201ENST00000537686 ZAP70P43403 619 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
GGA3-201ENST00000537686 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 RBM26Q5T8P6 1007 aaKnown RBP11.47□□□□□ -0.57
GGA3-201ENST00000537686 LPIN2Q92539 896 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 SPAG5Q96R06 1193 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 LRRC27Q9C0I9 530 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 A0A1B0GVL5 298 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 PRAMEF22A3QJZ6 481 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
GGA3-201ENST00000537686 DESP17661 470 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 CCDC150Q8NCX0 1101 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 NOP2P46087 812 aaKnown RBP11.47□□□□□ -0.57
GGA3-201ENST00000537686 STX17P56962 302 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
GGA3-201ENST00000537686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.572e-6■□□□□ 11
GGA3-201ENST00000537686 TMCO5BA8MYB1 307 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 OTUD7BQ6GQQ9 843 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 SMARCC2Q8TAQ2 1214 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 EYA3Q99504 573 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 CARD10Q9BWT7 1032 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 TNS3Q68CZ2 1445 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 MCM7P33993 719 aa11.46□□□□□ -0.57
GGA3-201ENST00000537686 RRP36Q96EU6 259 aaKnown RBP11.46□□□□□ -0.57
GGA3-201ENST00000537686 GNA11P29992 359 aa11.46□□□□□ -0.58
GGA3-201ENST00000537686 KRT2P35908 639 aa11.46□□□□□ -0.58
GGA3-201ENST00000537686 KRT79Q5XKE5 535 aa11.46□□□□□ -0.58
GGA3-201ENST00000537686 TMEM87BQ96K49 555 aa11.46□□□□□ -0.58
GGA3-201ENST00000537686 GOLGA6L9A6NEM1 432 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 SPDYE3A6NKU9 549 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 GSPT1P15170 499 aaKnown RBP11.45□□□□□ -0.58
GGA3-201ENST00000537686 ATP5JP18859 108 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 MMRN2Q9H8L6 949 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 SAP30BPQ9UHR5 308 aaKnown RBP11.45□□□□□ -0.58
GGA3-201ENST00000537686 ANKRD62A6NC57 917 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 CYP27B1O15528 508 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 PROSER3Q2NL68 480 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 BEND3Q5T5X7 828 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 HSPA4P34932 840 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 DTHD1Q6ZMT9 781 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
GGA3-201ENST00000537686 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
GGA3-201ENST00000537686 PLIN2Q99541 437 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 MYL10Q9BUA6 226 aa11.45□□□□□ -0.58
GGA3-201ENST00000537686 PTGS1P23219 599 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 IQUBQ8NA54 791 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 NOLC1Q14978 699 aaKnown RBP eCLIP11.44□□□□□ -0.585e-6■□□□□ 9.2
GGA3-201ENST00000537686 ZKSCAN5Q9Y2L8 839 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
GGA3-201ENST00000537686 ZNF532Q9HCE3 1301 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 VWA3AA6NCI4 1184 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 PRPF4BQ13523 1007 aaKnown RBP11.44□□□□□ -0.58
GGA3-201ENST00000537686 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■■□□□ 13
GGA3-201ENST00000537686 MAP9Q49MG5 647 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 CEP135Q66GS9 1140 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 DIS3L2Q8IYB7 885 aaKnown RBP11.44□□□□□ -0.58
GGA3-201ENST00000537686 RNF216Q9NWF9 866 aaPredicted RBP11.44□□□□□ -0.58
GGA3-201ENST00000537686 DNAI1Q9UI46 699 aa11.44□□□□□ -0.58
GGA3-201ENST00000537686 KIAA0754O94854 1291 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 RILPL1Q5EBL4 403 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 CCDC174Q6PII3 467 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 ALS2CR12Q96Q35 445 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 CTAGE1Q96RT6 745 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 JADE2Q9NQC1 790 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 AATFQ9NY61 560 aaKnown RBP eCLIP11.43□□□□□ -0.58
GGA3-201ENST00000537686 KDRP35968 1356 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 GSTTP1A0A1W2PQM5 241 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 RPS8P62241 208 aaKnown RBP11.43□□□□□ -0.58
GGA3-201ENST00000537686 ZNF174Q15697 407 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 CTNNBL1Q8WYA6 563 aaPredicted RBP11.43□□□□□ -0.58
GGA3-201ENST00000537686 GGA1Q9UJY5 639 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 COL3A1P02461 1466 aaPredicted RBP11.43□□□□□ -0.58
GGA3-201ENST00000537686 JAK2O60674 1132 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
GGA3-201ENST00000537686 FAM160A1Q05DH4 1040 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 LETM2Q2VYF4 491 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 WDR66Q8TBY9 1149 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 IFNKQ9P0W0 207 aa11.43□□□□□ -0.58
GGA3-201ENST00000537686 ATL3Q6DD88 541 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 SPATA5Q8NB90 893 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 PHKBQ93100 1093 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 RBM17Q96I25 401 aaKnown RBP11.42□□□□□ -0.58
GGA3-201ENST00000537686 A0A0D9SFI3 127 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 BICD1Q96G01 975 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 SEC62Q99442 399 aaKnown RBP11.42□□□□□ -0.58
GGA3-201ENST00000537686 LLPHQ9BRT6 129 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms