RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 DSCC1Q9BVC3 393 aa18.74■□□□□ 0.59
SFSWAP-206ENST00000537582 IGSF3O75054 1194 aa18.73■□□□□ 0.59
SFSWAP-206ENST00000537582 APPP05067 770 aa18.73■□□□□ 0.59
SFSWAP-206ENST00000537582 RBM5P52756 815 aaKnown RBP eCLIP18.73■□□□□ 0.59
SFSWAP-206ENST00000537582 PPP4CP60510 307 aa18.73■□□□□ 0.59
SFSWAP-206ENST00000537582 CFAP100Q494V2 611 aa18.73■□□□□ 0.59
SFSWAP-206ENST00000537582 HHIPL2Q6UWX4 724 aa18.73■□□□□ 0.59
SFSWAP-206ENST00000537582 AGBL3Q8NEM8 1001 aa18.73■□□□□ 0.59
SFSWAP-206ENST00000537582 EGFRP00533 1210 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 FGAP02671 866 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 USP17L8P0C7I0 530 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 HSPA4P34932 840 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 RBM25P49756 843 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 NECTIN1Q15223 517 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 TMED8Q6PL24 325 aaPredicted RBP18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 SLF2Q8IX21 1173 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 ZDHHC15Q96MV8 337 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 SERPINA10Q9UK55 444 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 PATL2C9JE40 543 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 DDNO94850 711 aaPredicted RBP18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 BAG3O95817 575 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 EVX2Q03828 476 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 CREB3L3Q68CJ9 461 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 IFNL3Q8IZI9 196 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 KIF2CQ99661 725 aa18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 NOL10Q9BSC4 688 aaKnown RBP18.72■□□□□ 0.59
SFSWAP-206ENST00000537582 SLC27A2O14975 620 aa18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 CACNB3P54284 484 aa18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 HDLBPQ00341 1268 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 CDC42EP5Q6NZY7 148 aa18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 PRMT6Q96LA8 375 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 CRNKL1Q9BZJ0 848 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.59
SFSWAP-206ENST00000537582 EIF5BO60841 1220 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 GNAT2P19087 354 aa18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 HAND2P61296 217 aa18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 COL9A3Q14050 684 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 SLC4A8Q2Y0W8 1093 aa18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 MICALL2Q8IY33 904 aa18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 MRIQ9BWK5 157 aa18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 USP40Q9NVE5 1235 aa18.7■□□□□ 0.58
SFSWAP-206ENST00000537582 CYP2D7A0A087X1C5 515 aa18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 CYP21A2P08686 494 aa18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 RPS12P25398 132 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 MAPKAPK5Q8IW41 473 aa18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 GPC2Q8N158 579 aa18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 TDRD3Q9H7E2 651 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 DCP1AQ9NPI6 582 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 SNX14Q9Y5W7 946 aa18.69■□□□□ 0.58
SFSWAP-206ENST00000537582 SPDYE2BA6NHP3 402 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 EPB41L2O43491 1005 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 WDHD1O75717 1129 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 SPDYE6P0CI01 402 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 CYP2D6P10635 497 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 TDO2P48775 406 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 ZNF280AP59817 542 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 NFIAQ12857 509 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 RBM26Q5T8P6 1007 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 NBPF3Q9H094 633 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 NAPBQ9H115 298 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 DDX4Q9NQI0 724 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 MKRN1Q9UHC7 482 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 CNOT7Q9UIV1 285 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 USP5P45974 858 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 PICALMQ13492 652 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 DLGAP5Q15398 846 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 ADCK5Q3MIX3 580 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 SAMD7Q7Z3H4 446 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 DPF2Q92785 391 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 MYOZ2Q9NPC6 264 aa18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 SAP30BPQ9UHR5 308 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-206ENST00000537582 CDK5RAP2Q96SN8 1893 aa18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 FLT1P17948 1338 aa18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 CLRN2A0PK11 232 aa18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 MCCP23508 829 aa18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 ALX1Q15699 326 aa18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 TBC1D10BQ4KMP7 808 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 STOX1Q6ZVD7 989 aa18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 KCNB2Q92953 911 aa18.67■□□□□ 0.58
SFSWAP-206ENST00000537582 ASTN2O75129 1339 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 PLCG2P16885 1265 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 EPS15P42566 896 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 NBPF9Q3BBW0 867 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 CTR9Q6PD62 1173 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 TBC1D10CQ8IV04 446 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 ZFPM1Q8IX07 1006 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 STK11IPQ8N1F8 1099 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 ZBED3Q96IU2 234 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 NACAP1Q9BZK3 213 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 INCENPQ9NQS7 918 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 GPRC5DQ9NZD1 345 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 TACC3Q9Y6A5 838 aa18.66■□□□□ 0.58
SFSWAP-206ENST00000537582 BAZ2AQ9UIF9 1905 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms