RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, human

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGA2-208	ENST00000537429	EGFR	P00533	1210 aa		29.16	■■■□□ 2.26
HMGA2-208	ENST00000537429	SPDYE6	P0CI01	402 aa		29.16	■■■□□ 2.26
HMGA2-208	ENST00000537429	DYNLL1	P63167	89 aa	Known RBP	29.16	■■■□□ 2.26
HMGA2-208	ENST00000537429	RBM26	Q5T8P6	1007 aa	Known RBP	29.16	■■■□□ 2.26
HMGA2-208	ENST00000537429	SAMD7	Q7Z3H4	446 aa		29.16	■■■□□ 2.26
HMGA2-208	ENST00000537429	AIDA	Q96BJ3	306 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	NOL10	Q9BSC4	688 aa	Known RBP	29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	ESYT1	Q9BSJ8	1104 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	RAD50	Q92878	1312 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	POTEC	B2RU33	542 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	SGSM2	O43147	1006 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	GPAA1	O43292	621 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	MBD4	O95243	580 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	ZNF589	Q86UQ0	364 aa	Predicted RBP	29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	CERS3	Q8IU89	383 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	LCORL	Q8N3X6	602 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	HACL1	Q9UJ83	578 aa		29.15	■■■□□ 2.26
HMGA2-208	ENST00000537429	SCN4A	P35499	1836 aa		29.14	■■■□□ 2.26
HMGA2-208	ENST00000537429	WNT10B	O00744	389 aa		29.14	■■■□□ 2.25
HMGA2-208	ENST00000537429	RHBDL3	P58872	404 aa		29.14	■■■□□ 2.25
HMGA2-208	ENST00000537429	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	29.14	■■■□□ 2.25
HMGA2-208	ENST00000537429	CCDC129	Q6ZRS4	1044 aa		29.14	■■■□□ 2.25
HMGA2-208	ENST00000537429	STRBP	Q96SI9	672 aa	Known RBP	29.14	■■■□□ 2.25
HMGA2-208	ENST00000537429	ARMT1	Q9H993	441 aa		29.14	■■■□□ 2.25
HMGA2-208	ENST00000537429	ADARB2	Q9NS39	739 aa	Known RBP	29.14	■■■□□ 2.25
HMGA2-208	ENST00000537429	KIF4B	Q2VIQ3	1234 aa		29.13	■■■□□ 2.25
HMGA2-208	ENST00000537429	C8orf34	Q49A92	452 aa		29.13	■■■□□ 2.25
HMGA2-208	ENST00000537429	IQCA1L	A6NCM1	817 aa		29.12	■■■□□ 2.25
HMGA2-208	ENST00000537429	CDC42EP5	Q6NZY7	148 aa		29.12	■■■□□ 2.25
HMGA2-208	ENST00000537429	TRPM4	Q8TD43	1214 aa		29.12	■■■□□ 2.25
HMGA2-208	ENST00000537429	CCDC171	Q6TFL3	1326 aa		29.12	■■■□□ 2.25
HMGA2-208	ENST00000537429	PLCG2	P16885	1265 aa		29.11	■■■□□ 2.25
HMGA2-208	ENST00000537429	NBPF9	Q3BBW0	867 aa		29.11	■■■□□ 2.25
HMGA2-208	ENST00000537429	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	29.11	■■■□□ 2.25
HMGA2-208	ENST00000537429	TDRD3	Q9H7E2	651 aa	Known RBP	29.11	■■■□□ 2.25
HMGA2-208	ENST00000537429	USP40	Q9NVE5	1235 aa		29.11	■■■□□ 2.25
HMGA2-208	ENST00000537429	EPHX2	P34913	555 aa		29.1	■■■□□ 2.25
HMGA2-208	ENST00000537429	HIRA	P54198	1017 aa	Predicted RBP	29.1	■■■□□ 2.25
HMGA2-208	ENST00000537429	MFAP1	P55081	439 aa	Known RBP	29.1	■■■□□ 2.25
HMGA2-208	ENST00000537429	RRAGC	Q9HB90	399 aa		29.1	■■■□□ 2.25
HMGA2-208	ENST00000537429	TAF1D	Q9H5J8	278 aa	Predicted RBP	29.09	■■■□□ 2.25
HMGA2-208	ENST00000537429	GNAT2	P19087	354 aa		29.08	■■■□□ 2.25
HMGA2-208	ENST00000537429	CRNKL1	Q9BZJ0	848 aa	Known RBP	29.08	■■■□□ 2.25
HMGA2-208	ENST00000537429	ECM29	Q5VYK3	1845 aa		29.08	■■■□□ 2.25
HMGA2-208	ENST00000537429	MYO1B	O43795	1136 aa		29.07	■■■□□ 2.24
HMGA2-208	ENST00000537429	VEGFA	P15692	232 aa	Predicted RBP	29.07	■■■□□ 2.24
HMGA2-208	ENST00000537429	SPDYE2	Q495Y8	402 aa		29.07	■■■□□ 2.24
HMGA2-208	ENST00000537429	USP50	Q70EL3	339 aa	Predicted RBP	29.07	■■■□□ 2.24
HMGA2-208	ENST00000537429	TEX11	Q8IYF3	940 aa		29.07	■■■□□ 2.24
HMGA2-208	ENST00000537429	ZNF70	Q9UC06	446 aa	Predicted RBP	29.07	■■■□□ 2.24
HMGA2-208	ENST00000537429	PRKAB2	O43741	272 aa		29.06	■■■□□ 2.24
HMGA2-208	ENST00000537429	WDHD1	O75717	1129 aa	Predicted RBP	29.06	■■■□□ 2.24
HMGA2-208	ENST00000537429	VPS53	Q5VIR6	699 aa		29.06	■■■□□ 2.24
HMGA2-208	ENST00000537429	SLC4A4	Q9Y6R1	1079 aa		29.06	■■■□□ 2.24
HMGA2-208	ENST00000537429	CLRN2	A0PK11	232 aa		29.05	■■■□□ 2.24
HMGA2-208	ENST00000537429	FOXP2	O15409	715 aa		29.05	■■■□□ 2.24
HMGA2-208	ENST00000537429	CDK5RAP2	Q96SN8	1893 aa		29.05	■■■□□ 2.24
HMGA2-208	ENST00000537429	PATL2	C9JE40	543 aa	Known RBP	29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	HSPD1	P10809	573 aa	Known RBP	29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	YY1	P25490	414 aa		29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	EAPP	Q56P03	285 aa	Predicted RBP	29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	TGFBRAP1	Q8WUH2	860 aa		29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	SDR42E1	Q8WUS8	393 aa		29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	IDI2	Q9BXS1	227 aa		29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	NMRK2	Q9NPI5	230 aa		29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	GSG1L2	A8MUP6	293 aa		29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	CACNB3	P54284	484 aa		29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	ASTN2	O75129	1339 aa	Predicted RBP	29.04	■■■□□ 2.24
HMGA2-208	ENST00000537429	RPAP1	Q9BWH6	1393 aa	Predicted RBP	29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	FOCAD	Q5VW36	1801 aa		29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	NFIA	Q12857	509 aa		29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	PNMA8A	Q86V59	439 aa	Predicted RBP	29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	GPBP1L1	Q9HC44	474 aa	Predicted RBP	29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	ATP8A2	Q9NTI2	1148 aa		29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	TMOD2	Q9NZR1	351 aa		29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	MKRN1	Q9UHC7	482 aa	Known RBP	29.03	■■■□□ 2.24
HMGA2-208	ENST00000537429	USP5	P45974	858 aa		29.02	■■■□□ 2.24
HMGA2-208	ENST00000537429	FKBP1C	Q5VVH2	108 aa		29.02	■■■□□ 2.24
HMGA2-208	ENST00000537429	KIAA1211	Q6ZU35	1233 aa		29.02	■■■□□ 2.24
HMGA2-208	ENST00000537429	DSCC1	Q9BVC3	393 aa		29.02	■■■□□ 2.24
HMGA2-208	ENST00000537429	LSG1	Q9H089	658 aa	Known RBP	29.02	■■■□□ 2.24
HMGA2-208	ENST00000537429	DDX4	Q9NQI0	724 aa	Known RBP	29.02	■■■□□ 2.24
HMGA2-208	ENST00000537429	NPM3	O75607	178 aa	Known RBP	29.01	■■■□□ 2.23
HMGA2-208	ENST00000537429	PTH1R	Q03431	593 aa		29.01	■■■□□ 2.23
HMGA2-208	ENST00000537429	DCP1A	Q9NPI6	582 aa	Predicted RBP	29.01	■■■□□ 2.23
HMGA2-208	ENST00000537429	ANO2	Q9NQ90	1003 aa		29.01	■■■□□ 2.23
HMGA2-208	ENST00000537429	FAM198A	Q9UFP1	575 aa		29.01	■■■□□ 2.23
HMGA2-208	ENST00000537429	REC8	O95072	547 aa		29	■■■□□ 2.23
HMGA2-208	ENST00000537429	SEC24B	O95487	1268 aa		29	■■■□□ 2.23
HMGA2-208	ENST00000537429	GIMAP6	Q6P9H5	292 aa		29	■■■□□ 2.23
HMGA2-208	ENST00000537429	IFNL3	Q8IZI9	196 aa		29	■■■□□ 2.23
HMGA2-208	ENST00000537429	VEZT	Q9HBM0	779 aa		29	■■■□□ 2.23
HMGA2-208	ENST00000537429	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	29	■■■□□ 2.23
HMGA2-208	ENST00000537429	FLT1	P17948	1338 aa		29	■■■□□ 2.23
HMGA2-208	ENST00000537429	APP	P05067	770 aa		28.99	■■■□□ 2.23
HMGA2-208	ENST00000537429	ANGEL2	Q5VTE6	544 aa	Known RBP	28.99	■■■□□ 2.23
HMGA2-208	ENST00000537429	MAPKAPK5	Q8IW41	473 aa		28.99	■■■□□ 2.23
HMGA2-208	ENST00000537429	ZC3H15	Q8WU90	426 aa	Known RBP	28.99	■■■□□ 2.23
HMGA2-208	ENST00000537429	GGA3	Q9NZ52	723 aa		28.99	■■■□□ 2.23
HMGA2-208	ENST00000537429	PGAP2	Q9UHJ9	254 aa		28.99	■■■□□ 2.23

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