RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
CPSF7-217ENST00000537162 PARK7Q99497 189 aaKnown RBP12.49□□□□□ -0.41
CPSF7-217ENST00000537162 CD209Q9NNX6 404 aa12.49□□□□□ -0.41
CPSF7-217ENST00000537162 HMGCRP04035 888 aa12.48□□□□□ -0.41
CPSF7-217ENST00000537162 INPP5BP32019 993 aa12.48□□□□□ -0.41
CPSF7-217ENST00000537162 PPATQ06203 517 aa12.48□□□□□ -0.41
CPSF7-217ENST00000537162 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
CPSF7-217ENST00000537162 CCDC85BQ15834 202 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-217ENST00000537162 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
CPSF7-217ENST00000537162 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
CPSF7-217ENST00000537162 SNAP23O00161 211 aa12.47□□□□□ -0.41
CPSF7-217ENST00000537162 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-217ENST00000537162 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
CPSF7-217ENST00000537162 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-217ENST00000537162 CHD9Q3L8U1 2897 aa12.47□□□□□ -0.41
CPSF7-217ENST00000537162 PDE8AO60658 829 aa12.46□□□□□ -0.41
CPSF7-217ENST00000537162 CACNB3P54284 484 aa12.46□□□□□ -0.41
CPSF7-217ENST00000537162 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
CPSF7-217ENST00000537162 TFF2Q03403 129 aa12.45□□□□□ -0.42
CPSF7-217ENST00000537162 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
CPSF7-217ENST00000537162 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
CPSF7-217ENST00000537162 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
CPSF7-217ENST00000537162 TRIB2Q92519 343 aa12.45□□□□□ -0.42
CPSF7-217ENST00000537162 BADQ92934 168 aa12.45□□□□□ -0.42
CPSF7-217ENST00000537162 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
CPSF7-217ENST00000537162 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
CPSF7-217ENST00000537162 WDFY4Q6ZS81 3184 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 PER1O15534 1290 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-217ENST00000537162 GPR37L1O60883 481 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 KCNQ1P51787 676 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-217ENST00000537162 NHLH1Q02575 133 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 ADGRE1Q14246 886 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 RIC3Q7Z5B4 369 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 COA7Q96BR5 231 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 ZNF576Q9H609 170 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 GREM2Q9H772 168 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 GJD2Q9UKL4 321 aa12.44□□□□□ -0.42
CPSF7-217ENST00000537162 HSPA5P11021 654 aaKnown RBP12.43□□□□□ -0.42
CPSF7-217ENST00000537162 DNAJB2P25686 324 aa12.43□□□□□ -0.42
CPSF7-217ENST00000537162 EPHB4P54760 987 aa12.43□□□□□ -0.42
CPSF7-217ENST00000537162 AKNAD1Q5T1N1 836 aa12.43□□□□□ -0.42
CPSF7-217ENST00000537162 MAP3K21Q5TCX8 1036 aa12.43□□□□□ -0.42
CPSF7-217ENST00000537162 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
CPSF7-217ENST00000537162 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
CPSF7-217ENST00000537162 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
CPSF7-217ENST00000537162 SENP6Q9GZR1 1112 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-217ENST00000537162 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
CPSF7-217ENST00000537162 PCCAP05165 728 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-217ENST00000537162 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
CPSF7-217ENST00000537162 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
CPSF7-217ENST00000537162 PRDM12Q9H4Q4 367 aa12.42□□□□□ -0.42
CPSF7-217ENST00000537162 MYH3P11055 1940 aa12.42□□□□□ -0.42
CPSF7-217ENST00000537162 PTPRFP10586 1907 aa12.41□□□□□ -0.42
CPSF7-217ENST00000537162 IL1R1P14778 569 aa12.41□□□□□ -0.42
CPSF7-217ENST00000537162 CCND3P30281 292 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-217ENST00000537162 TNNI2P48788 182 aa12.41□□□□□ -0.42
CPSF7-217ENST00000537162 RTP1P59025 263 aa12.41□□□□□ -0.42
CPSF7-217ENST00000537162 FKBP1AP62942 108 aaKnown RBP12.41□□□□□ -0.42
CPSF7-217ENST00000537162 TTLL11Q8NHH1 800 aa12.41□□□□□ -0.42
CPSF7-217ENST00000537162 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
CPSF7-217ENST00000537162 PLXNA1Q9UIW2 1896 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 CTSWP56202 376 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 GRIK5Q16478 980 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.42
CPSF7-217ENST00000537162 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-217ENST00000537162 CXXC1Q9P0U4 656 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-217ENST00000537162 PRKAG2Q9UGJ0 569 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.42
CPSF7-217ENST00000537162 RLFQ13129 1914 aa12.4□□□□□ -0.42
CPSF7-217ENST00000537162 CACNB2Q08289 660 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-217ENST00000537162 MYD88Q99836 296 aa12.39□□□□□ -0.43
CPSF7-217ENST00000537162 ZNF341Q9BYN7 854 aa12.39□□□□□ -0.43
CPSF7-217ENST00000537162 PRDM5Q9NQX1 630 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-217ENST00000537162 ATP11BQ9Y2G3 1177 aa12.39□□□□□ -0.43
CPSF7-217ENST00000537162 LRRC37A2A6NM11 1700 aa12.39□□□□□ -0.43
CPSF7-217ENST00000537162 TRIM43BA6NCK2 446 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 CYP2B6P20813 491 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 ITGB8P26012 769 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 CRKP46108 304 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 GADL1Q6ZQY3 521 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 SMCR8Q8TEV9 937 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-217ENST00000537162 TRIM43Q96BQ3 446 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-217ENST00000537162 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 PHOX2BQ99453 314 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 NUDCQ9Y266 331 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 CHD7Q9P2D1 2997 aa12.38□□□□□ -0.43
CPSF7-217ENST00000537162 USP34Q70CQ2 3546 aa12.37□□□□□ -0.43
CPSF7-217ENST00000537162 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
CPSF7-217ENST00000537162 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-217ENST00000537162 TAF5LO75529 589 aa12.37□□□□□ -0.43
CPSF7-217ENST00000537162 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
CPSF7-217ENST00000537162 IGFBP4P22692 258 aa12.37□□□□□ -0.43
CPSF7-217ENST00000537162 PBX2P40425 430 aa12.37□□□□□ -0.43
CPSF7-217ENST00000537162 KCNJ4P48050 445 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms