RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 ARHGAP4P98171 946 aa9.92□□□□□ -0.82
CCDC60-203ENST00000536742 TNP2Q05952 138 aa9.92□□□□□ -0.82
CCDC60-203ENST00000536742 ECM1Q16610 540 aa9.92□□□□□ -0.82
CCDC60-203ENST00000536742 BIN2Q9UBW5 565 aaPredicted RBP9.92□□□□□ -0.82
CCDC60-203ENST00000536742 SBF2Q86WG5 1849 aa9.91□□□□□ -0.82
CCDC60-203ENST00000536742 NDUFB5O43674 189 aa9.91□□□□□ -0.82
CCDC60-203ENST00000536742 EDARADDQ8WWZ3 215 aa9.91□□□□□ -0.82
CCDC60-203ENST00000536742 RRAGCQ9HB90 399 aa9.91□□□□□ -0.82
CCDC60-203ENST00000536742 PRDM11Q9NQV5 511 aa9.91□□□□□ -0.82
CCDC60-203ENST00000536742 STRN4Q9NRL3 753 aa9.91□□□□□ -0.82
CCDC60-203ENST00000536742 KCNH4Q9UQ05 1017 aa9.91□□□□□ -0.82
CCDC60-203ENST00000536742 FNDC3AQ9Y2H6 1198 aaKnown RBP9.91□□□□□ -0.82
CCDC60-203ENST00000536742 TECPR2O15040 1411 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 C2CD2LO14523 706 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 OPLAHO14841 1288 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 KHNYNO15037 678 aaKnown RBP9.9□□□□□ -0.82
CCDC60-203ENST00000536742 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.82
CCDC60-203ENST00000536742 AMPD1P23109 780 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 AAMPQ13685 434 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 TCP11L2Q8N4U5 519 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 DCTN4Q9UJW0 460 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 GGA1Q9UJY5 639 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 BRPF3Q9ULD4 1205 aa9.9□□□□□ -0.82
CCDC60-203ENST00000536742 THRAP3Q9Y2W1 955 aaKnown RBP9.9□□□□□ -0.82
CCDC60-203ENST00000536742 COL24A1Q17RW2 1714 aa9.9□□□□□ -0.83
CCDC60-203ENST00000536742 DCDC2BA2VCK2 349 aa9.89□□□□□ -0.83
CCDC60-203ENST00000536742 ZBTB39O15060 712 aa9.89□□□□□ -0.83
CCDC60-203ENST00000536742 EHHADHQ08426 723 aa9.89□□□□□ -0.83
CCDC60-203ENST00000536742 TMCO4Q5TGY1 634 aa9.89□□□□□ -0.83
CCDC60-203ENST00000536742 MARK1Q9P0L2 795 aa9.89□□□□□ -0.83
CCDC60-203ENST00000536742 TOPAZ1Q8N9V7 1692 aa9.89□□□□□ -0.83
CCDC60-203ENST00000536742 MYOM3Q5VTT5 1437 aa9.89□□□□□ -0.83
CCDC60-203ENST00000536742 EGFRP00533 1210 aa9.88□□□□□ -0.83
CCDC60-203ENST00000536742 EVA1CP58658 441 aa9.88□□□□□ -0.83
CCDC60-203ENST00000536742 FAM26DQ5JW98 314 aa9.88□□□□□ -0.83
CCDC60-203ENST00000536742 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
CCDC60-203ENST00000536742 RBCK1Q9BYM8 510 aa9.88□□□□□ -0.83
CCDC60-203ENST00000536742 RTCBQ9Y3I0 505 aaKnown RBP9.88□□□□□ -0.83
CCDC60-203ENST00000536742 NAIPQ13075 1403 aa9.88□□□□□ -0.83
CCDC60-203ENST00000536742 PEAK1Q9H792 1746 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 CCDC85CA6NKD9 419 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 FZD6O60353 706 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 ARAFP10398 606 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 ERCC3P19447 782 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 CTCFP49711 727 aaPredicted RBP9.87□□□□□ -0.83
CCDC60-203ENST00000536742 NEUROD1Q13562 356 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 CCDC27Q2M243 656 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 ZNF326Q5BKZ1 582 aaKnown RBP9.87□□□□□ -0.83
CCDC60-203ENST00000536742 GPAT2Q6NUI2 795 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 SLCO4C1Q6ZQN7 724 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 NMRK2Q9NPI5 230 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 MKL2Q9ULH7 1088 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 PRR12Q9ULL5 1215 aa9.87□□□□□ -0.83
CCDC60-203ENST00000536742 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
CCDC60-203ENST00000536742 SHISA8B8ZZ34 492 aa9.86□□□□□ -0.83
CCDC60-203ENST00000536742 FOXN1O15353 648 aa9.86□□□□□ -0.83
CCDC60-203ENST00000536742 PDGFAP04085 211 aa9.86□□□□□ -0.83
CCDC60-203ENST00000536742 CD33P20138 364 aa9.86□□□□□ -0.83
CCDC60-203ENST00000536742 C1orf229Q6ZS94 237 aaPredicted RBP9.86□□□□□ -0.83
CCDC60-203ENST00000536742 EDEM1Q92611 657 aa9.86□□□□□ -0.83
CCDC60-203ENST00000536742 AVENQ9NQS1 362 aaPredicted RBP9.86□□□□□ -0.83
CCDC60-203ENST00000536742 NEURL1BA8MQ27 555 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 IGHA1P01876 353 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 PDE12Q6L8Q7 609 aaKnown RBP9.85□□□□□ -0.83
CCDC60-203ENST00000536742 PTF1AQ7RTS3 328 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 ZSCAN29Q8IWY8 852 aaPredicted RBP9.85□□□□□ -0.83
CCDC60-203ENST00000536742 RGL4Q8IZJ4 473 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 GJD3Q8N144 294 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 SMC1BQ8NDV3 1235 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 ATP7BP35670 1465 aa9.85□□□□□ -0.83
CCDC60-203ENST00000536742 ADH6P28332 368 aa9.84□□□□□ -0.83
CCDC60-203ENST00000536742 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
CCDC60-203ENST00000536742 XKR5Q6UX68 686 aa9.84□□□□□ -0.83
CCDC60-203ENST00000536742 NUDT16Q96DE0 195 aaKnown RBP9.84□□□□□ -0.83
CCDC60-203ENST00000536742 DMRTB1Q96MA1 342 aa9.84□□□□□ -0.83
CCDC60-203ENST00000536742 PDE4DIPQ5VU43 2346 aa9.84□□□□□ -0.83
CCDC60-203ENST00000536742 BCL9O00512 1426 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 PIK3R2O00459 728 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 EPXP11678 715 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 SNRPNP63162 240 aaKnown RBP9.83□□□□□ -0.84
CCDC60-203ENST00000536742 SFSWAPQ12872 951 aaKnown RBP9.83□□□□□ -0.84
CCDC60-203ENST00000536742 CCINQ13939 588 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 ATCAYQ86WG3 371 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 CMTR1Q8N1G2 835 aaKnown RBP9.83□□□□□ -0.84
CCDC60-203ENST00000536742 DCAF5Q96JK2 942 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 KCNMB2Q9Y691 235 aa9.83□□□□□ -0.84
CCDC60-203ENST00000536742 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 FMN2Q9NZ56 1722 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 NEFLP07196 543 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 MAPK1P28482 360 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 SPEM2Q0P670 501 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 BTBD6Q96KE9 485 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 ASB16Q96NS5 453 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 FAM129BQ96TA1 746 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 ANKRD30AQ9BXX3 1397 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 NRXN1Q9ULB1 1477 aa9.82□□□□□ -0.84
CCDC60-203ENST00000536742 TNRC18O15417 2968 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms