RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 SERPINA10Q9UK55 444 aa13.81□□□□□ -0.2
CDCA3-206ENST00000536241 GAKO14976 1311 aa13.81□□□□□ -0.2
CDCA3-206ENST00000536241 PATL2C9JE40 543 aaKnown RBP13.8□□□□□ -0.2
CDCA3-206ENST00000536241 EIF5BO60841 1220 aaKnown RBP13.8□□□□□ -0.2
CDCA3-206ENST00000536241 APPP05067 770 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 CFAP100Q494V2 611 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 SH3RF3Q8TEJ3 882 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-206ENST00000536241 MAP4K1Q92918 833 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 ZDHHC15Q96MV8 337 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 SLC4A4Q9Y6R1 1079 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 FOXP2O15409 715 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 RBM26Q5T8P6 1007 aaKnown RBP13.8□□□□□ -0.2
CDCA3-206ENST00000536241 PRMT6Q96LA8 375 aaPredicted RBP13.8□□□□□ -0.2
CDCA3-206ENST00000536241 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
CDCA3-206ENST00000536241 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 GNAT2P19087 354 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 RHBDL3P58872 404 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 DLGAP5Q15398 846 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 CDC42EP5Q6NZY7 148 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 SDR42E1Q8WUS8 393 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 DSCC1Q9BVC3 393 aa13.79□□□□□ -0.2
CDCA3-206ENST00000536241 UPF2Q9HAU5 1272 aaKnown RBP13.79□□□□□ -0.2
CDCA3-206ENST00000536241 H7C1D1 291 aa13.78□□□□□ -0.2
CDCA3-206ENST00000536241 FGAP02671 866 aa13.78□□□□□ -0.2
CDCA3-206ENST00000536241 ZNF280AP59817 542 aaPredicted RBP13.78□□□□□ -0.2
CDCA3-206ENST00000536241 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
CDCA3-206ENST00000536241 IFNL3Q8IZI9 196 aa13.78□□□□□ -0.2
CDCA3-206ENST00000536241 TGFBRAP1Q8WUH2 860 aa13.78□□□□□ -0.2
CDCA3-206ENST00000536241 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
CDCA3-206ENST00000536241 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
CDCA3-206ENST00000536241 MYOZ2Q9NPC6 264 aa13.78□□□□□ -0.2
CDCA3-206ENST00000536241 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
CDCA3-206ENST00000536241 EPB41L2O43491 1005 aaKnown RBP13.77□□□□□ -0.21
CDCA3-206ENST00000536241 EGFRP00533 1210 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 PLCG2P16885 1265 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 EPS15P42566 896 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 USP5P45974 858 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 MMP14P50281 582 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 NECTIN1Q15223 517 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 CERS3Q8IU89 383 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 TEX11Q8IYF3 940 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 GPRC5DQ9NZD1 345 aa13.77□□□□□ -0.21
CDCA3-206ENST00000536241 GLTPD2A6NH11 291 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 WNT10BO00744 389 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 NBPF9Q3BBW0 867 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 TBC1D10BQ4KMP7 808 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-206ENST00000536241 MTMR14Q8NCE2 650 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 EPB41L4AQ9HCS5 686 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-206ENST00000536241 DCP1AQ9NPI6 582 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-206ENST00000536241 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
CDCA3-206ENST00000536241 UTRNP46939 3433 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
CDCA3-206ENST00000536241 HSPA4P34932 840 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 CACNB3P54284 484 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 ALX1Q15699 326 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 MAPKAPK5Q8IW41 473 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-206ENST00000536241 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 NAPBQ9H115 298 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 ATP8A2Q9NTI2 1148 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 MKRN1Q9UHC7 482 aaKnown RBP13.75□□□□□ -0.21
CDCA3-206ENST00000536241 ADAMTSL1Q8N6G6 1762 aa13.75□□□□□ -0.21
CDCA3-206ENST00000536241 RPAP1Q9BWH6 1393 aaPredicted RBP13.75□□□□□ -0.21
CDCA3-206ENST00000536241 WDHD1O75717 1129 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-206ENST00000536241 TDO2P48775 406 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 ZNF70Q9UC06 446 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-206ENST00000536241 CTNNA3Q9UI47 895 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 ZC3H4Q9UPT8 1303 aaKnown RBP13.74□□□□□ -0.21
CDCA3-206ENST00000536241 TIAM2Q8IVF5 1701 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 CLRN2A0PK11 232 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 USP17L12C9JPN9 530 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 USP17L21D6R901 530 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 SLC27A2O14975 620 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 MCCP23508 829 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 LMOD1P29536 600 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-206ENST00000536241 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
CDCA3-206ENST00000536241 NFIAQ12857 509 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 PICALMQ13492 652 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 KIF4BQ2VIQ3 1234 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 GIMAP6Q6P9H5 292 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 CTR9Q6PD62 1173 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 TBC1D32Q96NH3 1257 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
CDCA3-206ENST00000536241 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 PALD1Q9ULE6 856 aa13.74□□□□□ -0.21
CDCA3-206ENST00000536241 CYP2D7A0A087X1C5 515 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 MINDY4BA8MYZ0 360 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 ZNF213O14771 459 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 MYO1BO43795 1136 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 CYP21A2P08686 494 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 HIRAP54198 1017 aaPredicted RBP13.73□□□□□ -0.21
CDCA3-206ENST00000536241 HAND2P61296 217 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms