RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 F8W031 263 aaPredicted RBP19.47■□□□□ 0.71
VAMP1-205ENST00000535927 DDNO94850 711 aaPredicted RBP19.47■□□□□ 0.71
VAMP1-205ENST00000535927 DIXDC1Q155Q3 683 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 CFAP100Q494V2 611 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 MICALL2Q8IY33 904 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 DDRGK1Q96HY6 314 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 ZBED3Q96IU2 234 aaPredicted RBP19.47■□□□□ 0.71
VAMP1-205ENST00000535927 STRBPQ96SI9 672 aaKnown RBP19.47■□□□□ 0.71
VAMP1-205ENST00000535927 RIOK1Q9BRS2 568 aaKnown RBP19.47■□□□□ 0.71
VAMP1-205ENST00000535927 CRNKL1Q9BZJ0 848 aaKnown RBP19.47■□□□□ 0.71
VAMP1-205ENST00000535927 MYOZ2Q9NPC6 264 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
VAMP1-205ENST00000535927 ATP8A2Q9NTI2 1148 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 TAOK2Q9UL54 1235 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 CCDC171Q6TFL3 1326 aa19.47■□□□□ 0.71
VAMP1-205ENST00000535927 SPDYE2BA6NHP3 402 aa19.46■□□□□ 0.71
VAMP1-205ENST00000535927 GPAA1O43292 621 aa19.46■□□□□ 0.71
VAMP1-205ENST00000535927 SPDYE6P0CI01 402 aa19.46■□□□□ 0.71
VAMP1-205ENST00000535927 SCNN1DP51172 638 aa19.46■□□□□ 0.71
VAMP1-205ENST00000535927 RBM5P52756 815 aaKnown RBP eCLIP19.46■□□□□ 0.71
VAMP1-205ENST00000535927 APOBEC3HQ6NTF7 200 aaKnown RBP19.46■□□□□ 0.71
VAMP1-205ENST00000535927 FAM227BQ96M60 508 aa19.46■□□□□ 0.71
VAMP1-205ENST00000535927 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
VAMP1-205ENST00000535927 PUS7LQ9H0K6 701 aaKnown RBP19.46■□□□□ 0.71
VAMP1-205ENST00000535927 HACL1Q9UJ83 578 aa19.46■□□□□ 0.71
VAMP1-205ENST00000535927 WDR90Q96KV7 1748 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 A0A0D9SFI3 127 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 PATL2C9JE40 543 aaKnown RBP19.45■□□□□ 0.7
VAMP1-205ENST00000535927 BTDP43251 543 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 ALX1Q15699 326 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 USP50Q70EL3 339 aaPredicted RBP19.45■□□□□ 0.7
VAMP1-205ENST00000535927 PNMA8AQ86V59 439 aaPredicted RBP19.45■□□□□ 0.7
VAMP1-205ENST00000535927 DNAJC5GQ8N7S2 189 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 ZC3H15Q8WU90 426 aaKnown RBP19.45■□□□□ 0.7
VAMP1-205ENST00000535927 DSCC1Q9BVC3 393 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 TMOD2Q9NZR1 351 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 CTNNA3Q9UI47 895 aa19.45■□□□□ 0.7
VAMP1-205ENST00000535927 C8orf34Q49A92 452 aa19.44■□□□□ 0.7
VAMP1-205ENST00000535927 ADGRA1Q86SQ6 560 aa19.44■□□□□ 0.7
VAMP1-205ENST00000535927 IDI2Q9BXS1 227 aa19.44■□□□□ 0.7
VAMP1-205ENST00000535927 NMRK2Q9NPI5 230 aa19.44■□□□□ 0.7
VAMP1-205ENST00000535927 AATFQ9NY61 560 aaKnown RBP eCLIP19.44■□□□□ 0.7
VAMP1-205ENST00000535927 MBD4O95243 580 aa19.43■□□□□ 0.7
VAMP1-205ENST00000535927 TNFAIP1Q13829 316 aa19.43■□□□□ 0.7
VAMP1-205ENST00000535927 USP40Q9NVE5 1235 aa19.43■□□□□ 0.7
VAMP1-205ENST00000535927 ZMYM6O95789 1325 aa19.43■□□□□ 0.7
VAMP1-205ENST00000535927 ECM29Q5VYK3 1845 aa19.42■□□□□ 0.7
VAMP1-205ENST00000535927 WNT10BO00744 389 aa19.42■□□□□ 0.7
VAMP1-205ENST00000535927 VEGFAP15692 232 aaPredicted RBP19.42■□□□□ 0.7
VAMP1-205ENST00000535927 RHBDL3P58872 404 aa19.42■□□□□ 0.7
VAMP1-205ENST00000535927 KIF4BQ2VIQ3 1234 aa19.42■□□□□ 0.7
VAMP1-205ENST00000535927 SPDYE2Q495Y8 402 aa19.42■□□□□ 0.7
VAMP1-205ENST00000535927 MIGA1Q8NAN2 632 aa19.42■□□□□ 0.7
VAMP1-205ENST00000535927 RBM46Q8TBY0 533 aaKnown RBP19.42■□□□□ 0.7
VAMP1-205ENST00000535927 PRMT6Q96LA8 375 aaPredicted RBP19.42■□□□□ 0.7
VAMP1-205ENST00000535927 PITPNM2Q9BZ72 1349 aa19.42■□□□□ 0.7
VAMP1-205ENST00000535927 M0R2C6 588 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 ENTPD3O75355 529 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 HSPD1P10809 573 aaKnown RBP19.41■□□□□ 0.7
VAMP1-205ENST00000535927 NT5C2P49902 561 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 CDC42EP5Q6NZY7 148 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 FAM83AQ86UY5 434 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 TEX11Q8IYF3 940 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 MAP4K1Q92918 833 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 SEC62Q99442 399 aaKnown RBP19.41■□□□□ 0.7
VAMP1-205ENST00000535927 BACH2Q9BYV9 841 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 UPF2Q9HAU5 1272 aaKnown RBP19.41■□□□□ 0.7
VAMP1-205ENST00000535927 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
VAMP1-205ENST00000535927 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
VAMP1-205ENST00000535927 EPS15P42566 896 aa19.4■□□□□ 0.7
VAMP1-205ENST00000535927 TNNI2P48788 182 aa19.4■□□□□ 0.7
VAMP1-205ENST00000535927 AMOTL1Q8IY63 956 aa19.4■□□□□ 0.7
VAMP1-205ENST00000535927 LCORLQ8N3X6 602 aa19.4■□□□□ 0.7
VAMP1-205ENST00000535927 IL27Q8NEV9 243 aa19.4■□□□□ 0.7
VAMP1-205ENST00000535927 DHX36Q9H2U1 1008 aaKnown RBP19.4■□□□□ 0.7
VAMP1-205ENST00000535927 ARMT1Q9H993 441 aa19.4■□□□□ 0.7
VAMP1-205ENST00000535927 EPHX2P34913 555 aa19.39■□□□□ 0.69
VAMP1-205ENST00000535927 USP5P45974 858 aa19.39■□□□□ 0.69
VAMP1-205ENST00000535927 SBK1Q52WX2 424 aa19.39■□□□□ 0.69
VAMP1-205ENST00000535927 ZNF589Q86UQ0 364 aaPredicted RBP19.39■□□□□ 0.69
VAMP1-205ENST00000535927 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
VAMP1-205ENST00000535927 ZNF70Q9UC06 446 aaPredicted RBP19.39■□□□□ 0.69
VAMP1-205ENST00000535927 PGAP2Q9UHJ9 254 aa19.39■□□□□ 0.69
VAMP1-205ENST00000535927 PPP2R3BQ9Y5P8 575 aa19.39■□□□□ 0.69
VAMP1-205ENST00000535927 GSG1L2A8MUP6 293 aa19.38■□□□□ 0.69
VAMP1-205ENST00000535927 COL2A1P02458 1487 aaPredicted RBP19.38■□□□□ 0.69
VAMP1-205ENST00000535927 APPP05067 770 aa19.38■□□□□ 0.69
VAMP1-205ENST00000535927 DYNLL1P63167 89 aaKnown RBP19.38■□□□□ 0.69
VAMP1-205ENST00000535927 RNF20Q5VTR2 975 aa19.38■□□□□ 0.69
VAMP1-205ENST00000535927 FOCADQ5VW36 1801 aa19.38■□□□□ 0.69
VAMP1-205ENST00000535927 SAMD7Q7Z3H4 446 aa19.38■□□□□ 0.69
VAMP1-205ENST00000535927 SH3RF3Q8TEJ3 882 aaPredicted RBP19.38■□□□□ 0.69
VAMP1-205ENST00000535927 TAF1DQ9H5J8 278 aaPredicted RBP19.38■□□□□ 0.69
VAMP1-205ENST00000535927 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
VAMP1-205ENST00000535927 MKRN1Q9UHC7 482 aaKnown RBP19.38■□□□□ 0.69
VAMP1-205ENST00000535927 WDHD1O75717 1129 aaPredicted RBP19.37■□□□□ 0.69
VAMP1-205ENST00000535927 CHGBP05060 677 aa19.37■□□□□ 0.69
VAMP1-205ENST00000535927 PCP11498 1178 aaKnown RBP19.37■□□□□ 0.69
VAMP1-205ENST00000535927 MCCP23508 829 aa19.37■□□□□ 0.69
VAMP1-205ENST00000535927 FSTL1Q12841 308 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms