RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SLC4A4Q9Y6R1 1079 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 RGL2O15211 777 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 TMEM87BQ96K49 555 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 SETDB2Q96T68 719 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 CLSTN2Q9H4D0 955 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 CHD4Q14839 1912 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 COL1A1P02452 1464 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-202ENST00000535906 CDC27P30260 824 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 METAP2P50579 478 aaKnown RBP eCLIP15.62■□□□□ 0.09
VPS33B-202ENST00000535906 ATL3Q6DD88 541 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 RBM43Q6ZSC3 357 aaKnown RBP15.62■□□□□ 0.09
VPS33B-202ENST00000535906 CCDC24Q8N4L8 307 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 ZNF396Q96N95 335 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-202ENST00000535906 LY9Q9HBG7 655 aa15.62■□□□□ 0.09
VPS33B-202ENST00000535906 CCNL1Q9UK58 526 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-202ENST00000535906 ZPR1O75312 459 aa15.61■□□□□ 0.09
VPS33B-202ENST00000535906 GNAT2P19087 354 aa15.61■□□□□ 0.09
VPS33B-202ENST00000535906 CYP7A1P22680 504 aa15.61■□□□□ 0.09
VPS33B-202ENST00000535906 TDO2P48775 406 aa15.61■□□□□ 0.09
VPS33B-202ENST00000535906 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
VPS33B-202ENST00000535906 AKNAD1Q5T1N1 836 aa15.61■□□□□ 0.09
VPS33B-202ENST00000535906 TYRO3Q06418 890 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 TMEM67Q5HYA8 995 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 NBPF5PQ86XG9 351 aaPredicted RBP15.6■□□□□ 0.09
VPS33B-202ENST00000535906 FAM84BQ96KN1 310 aaPredicted RBP15.6■□□□□ 0.09
VPS33B-202ENST00000535906 NYXQ9GZU5 481 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 R3HCC1Q9Y3T6 440 aaKnown RBP15.6■□□□□ 0.09
VPS33B-202ENST00000535906 MRVI1Q9Y6F6 885 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 THSD7AQ9UPZ6 1657 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 POLR3DP05423 398 aaPredicted RBP15.6■□□□□ 0.09
VPS33B-202ENST00000535906 CAVIN4Q5BKX8 364 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 MFSD6Q6ZSS7 791 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 SGMS1Q86VZ5 419 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 CCDC144CPQ8IYA2 1237 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 AIFM3Q96NN9 605 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 NLRP3Q96P20 1036 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 MYL10Q9BUA6 226 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 NACAP1Q9BZK3 213 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 GNL3LQ9NVN8 582 aaKnown RBP15.6■□□□□ 0.09
VPS33B-202ENST00000535906 RAI14Q9P0K7 980 aa15.6■□□□□ 0.09
VPS33B-202ENST00000535906 RPS8P62241 208 aaKnown RBP15.59■□□□□ 0.09
VPS33B-202ENST00000535906 NFXL1Q6ZNB6 911 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 CCAR1Q8IX12 1150 aaKnown RBP15.59■□□□□ 0.09
VPS33B-202ENST00000535906 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 ARHGEF1Q92888 912 aaKnown RBP15.59■□□□□ 0.09
VPS33B-202ENST00000535906 GOLPH3LQ9H4A5 285 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
VPS33B-202ENST00000535906 NHSQ6T4R5 1651 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 AP5Z1O43299 807 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 KLRK1P26718 216 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 LIFRP42702 1097 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 VPS37DQ86XT2 251 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 SDR42E1Q8WUS8 393 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 STAG1Q8WVM7 1258 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 CNNM2Q9H8M5 875 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 FAM217BQ9NTX9 383 aaPredicted RBP15.59■□□□□ 0.09
VPS33B-202ENST00000535906 TIAM2Q8IVF5 1701 aa15.59■□□□□ 0.09
VPS33B-202ENST00000535906 KIF28PB7ZC32 967 aa15.58■□□□□ 0.09
VPS33B-202ENST00000535906 IFIT3O14879 490 aaKnown RBP15.58■□□□□ 0.09
VPS33B-202ENST00000535906 ZBTB43O43298 467 aa15.58■□□□□ 0.09
VPS33B-202ENST00000535906 NTRK3Q16288 839 aa15.58■□□□□ 0.09
VPS33B-202ENST00000535906 RRP12Q5JTH9 1297 aaKnown RBP15.58■□□□□ 0.09
VPS33B-202ENST00000535906 FAM200AQ8TCP9 573 aa15.58■□□□□ 0.09
VPS33B-202ENST00000535906 PHKBQ93100 1093 aa15.58■□□□□ 0.09
VPS33B-202ENST00000535906 KRT23Q9C075 422 aa15.58■□□□□ 0.09
VPS33B-202ENST00000535906 RTEL1Q9NZ71 1219 aa15.58■□□□□ 0.09
VPS33B-202ENST00000535906 COL24A1Q17RW2 1714 aa15.58■□□□□ 0.08
VPS33B-202ENST00000535906 ME1P48163 572 aa15.58■□□□□ 0.08
VPS33B-202ENST00000535906 SNW1Q13573 536 aaKnown RBP15.58■□□□□ 0.08
VPS33B-202ENST00000535906 TPTE2Q6XPS3 522 aa15.58■□□□□ 0.08
VPS33B-202ENST00000535906 CLIC4Q9Y696 253 aa15.58■□□□□ 0.08
VPS33B-202ENST00000535906 CACNA1SQ13698 1873 aa15.58■□□□□ 0.08
VPS33B-202ENST00000535906 MAGEB6P1A0A0J9YX57 407 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 RRP9O43818 475 aaKnown RBP15.57■□□□□ 0.08
VPS33B-202ENST00000535906 ZNF384Q8TF68 577 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 ZKSCAN3Q9BRR0 538 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 PCDHA7Q9UN72 937 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 SMIM22K7EJ46 135 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 CDKL5O76039 1030 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 PLCB2Q00722 1185 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 KIF23Q02241 960 aaPredicted RBP15.57■□□□□ 0.08
VPS33B-202ENST00000535906 ANO6Q4KMQ2 910 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 MYSM1Q5VVJ2 828 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 FBXO33Q7Z6M2 555 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 MPNDQ8N594 471 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 LINC00301Q8NCQ3 95 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 PIBF1Q8WXW3 757 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 RIOK1Q9BRS2 568 aaKnown RBP15.57■□□□□ 0.08
VPS33B-202ENST00000535906 ALG1Q9BT22 464 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 EP400Q96L91 3159 aa15.57■□□□□ 0.08
VPS33B-202ENST00000535906 TAF1LQ8IZX4 1826 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 GOLGA8AA7E2F4 631 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 RANBP6O60518 1105 aaKnown RBP15.56■□□□□ 0.08
VPS33B-202ENST00000535906 TM4SF1P30408 202 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 PPARAQ07869 468 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 BRAPQ7Z569 592 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 ENGASEQ8NFI3 743 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms