RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 TEPSINQ96N21 525 aa13.42□□□□□ -0.26
CCDC60-202ENST00000535685 TDRD3Q9H7E2 651 aaKnown RBP13.42□□□□□ -0.26
CCDC60-202ENST00000535685 VEZTQ9HBM0 779 aa13.42□□□□□ -0.26
CCDC60-202ENST00000535685 GNL3LQ9NVN8 582 aaKnown RBP13.42□□□□□ -0.26
CCDC60-202ENST00000535685 IQSEC3Q9UPP2 1182 aaPredicted RBP13.42□□□□□ -0.26
CCDC60-202ENST00000535685 MYH2Q9UKX2 1941 aa13.42□□□□□ -0.26
CCDC60-202ENST00000535685 OTOFQ9HC10 1997 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 USP2O75604 605 aaPredicted RBP13.41□□□□□ -0.26
CCDC60-202ENST00000535685 TRPA1O75762 1119 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 ZBTB48P10074 688 aaPredicted RBP13.41□□□□□ -0.26
CCDC60-202ENST00000535685 IREB2P48200 963 aaKnown RBP13.41□□□□□ -0.26
CCDC60-202ENST00000535685 TNNI2P48788 182 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 INHBEP58166 350 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 NBPF12Q5TAG4 269 aaPredicted RBP13.41□□□□□ -0.26
CCDC60-202ENST00000535685 ZKSCAN2Q63HK3 967 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 SIL1Q9H173 461 aa13.41□□□□□ -0.26
CCDC60-202ENST00000535685 PA2G4Q9UQ80 394 aaKnown RBP13.41□□□□□ -0.26
CCDC60-202ENST00000535685 PDS5AQ29RF7 1337 aaKnown RBP13.4□□□□□ -0.26
CCDC60-202ENST00000535685 ZBED9Q6R2W3 1325 aa13.4□□□□□ -0.26
CCDC60-202ENST00000535685 SRGAP3O43295 1099 aa13.4□□□□□ -0.26
CCDC60-202ENST00000535685 GNAI2P04899 355 aa13.4□□□□□ -0.26
CCDC60-202ENST00000535685 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
CCDC60-202ENST00000535685 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
CCDC60-202ENST00000535685 SLC10A4Q96EP9 437 aa13.4□□□□□ -0.26
CCDC60-202ENST00000535685 DENND2AQ9ULE3 1009 aa13.4□□□□□ -0.26
CCDC60-202ENST00000535685 AK9Q5TCS8 1911 aa13.4□□□□□ -0.26
CCDC60-202ENST00000535685 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
CCDC60-202ENST00000535685 ANKRD13AQ8IZ07 590 aa13.39□□□□□ -0.27
CCDC60-202ENST00000535685 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
CCDC60-202ENST00000535685 RPAP1Q9BWH6 1393 aaPredicted RBP13.39□□□□□ -0.27
CCDC60-202ENST00000535685 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
CCDC60-202ENST00000535685 PRKG1Q13976 671 aa13.38□□□□□ -0.27
CCDC60-202ENST00000535685 FRAT1Q92837 279 aaPredicted RBP13.38□□□□□ -0.27
CCDC60-202ENST00000535685 WNK4Q96J92 1243 aa13.38□□□□□ -0.27
CCDC60-202ENST00000535685 MCOLN1Q9GZU1 580 aa13.38□□□□□ -0.27
CCDC60-202ENST00000535685 TNNQ9UQP3 1299 aa13.38□□□□□ -0.27
CCDC60-202ENST00000535685 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
CCDC60-202ENST00000535685 TCP10L2B9ZVM9 353 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 PHKA1P46020 1223 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 CCDC102BQ68D86 513 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 ZGPATQ8N5A5 531 aaKnown RBP13.37□□□□□ -0.27
CCDC60-202ENST00000535685 TMEM57Q8N5G2 664 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 EFCAB3Q8N7B9 438 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 CLMNQ96JQ2 1002 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 FZD1Q9UP38 647 aa13.37□□□□□ -0.27
CCDC60-202ENST00000535685 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
CCDC60-202ENST00000535685 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
CCDC60-202ENST00000535685 TIMM10P62072 90 aa13.36□□□□□ -0.27
CCDC60-202ENST00000535685 DGKZQ13574 1117 aa13.36□□□□□ -0.27
CCDC60-202ENST00000535685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCDC60-202ENST00000535685 CLUAP1Q96AJ1 413 aa13.36□□□□□ -0.27
CCDC60-202ENST00000535685 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
CCDC60-202ENST00000535685 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
CCDC60-202ENST00000535685 DAGLAQ9Y4D2 1042 aa13.36□□□□□ -0.27
CCDC60-202ENST00000535685 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 PRDX5P30044 214 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 ADORA1P30542 326 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 RGS19P49795 217 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 TFCP2Q12800 502 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
CCDC60-202ENST00000535685 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.35□□□□□ -0.27
CCDC60-202ENST00000535685 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
CCDC60-202ENST00000535685 CDAN1Q8IWY9 1227 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 SSH3Q8TE77 659 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 XAGE2Q96GT9 111 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 GPR108Q9NPR9 543 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 GAKO14976 1311 aa13.35□□□□□ -0.27
CCDC60-202ENST00000535685 GPR25O00155 361 aa13.34□□□□□ -0.27
CCDC60-202ENST00000535685 ZBTB7BO15156 539 aaPredicted RBP13.34□□□□□ -0.27
CCDC60-202ENST00000535685 GJA5P36382 358 aa13.34□□□□□ -0.27
CCDC60-202ENST00000535685 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
CCDC60-202ENST00000535685 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
CCDC60-202ENST00000535685 G3BP1Q13283 466 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC60-202ENST00000535685 RASGRF1Q13972 1273 aa13.34□□□□□ -0.27
CCDC60-202ENST00000535685 PKN2Q16513 984 aaKnown RBP13.34□□□□□ -0.27
CCDC60-202ENST00000535685 CDC42EP5Q6NZY7 148 aa13.34□□□□□ -0.27
CCDC60-202ENST00000535685 FAM151AQ8WW52 585 aa13.34□□□□□ -0.27
CCDC60-202ENST00000535685 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
CCDC60-202ENST00000535685 PDE4DIPQ5VU43 2346 aa13.33□□□□□ -0.28
CCDC60-202ENST00000535685 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
CCDC60-202ENST00000535685 ARID4AP29374 1257 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-202ENST00000535685 CACNB3P54284 484 aa13.33□□□□□ -0.28
CCDC60-202ENST00000535685 DCAF15Q66K64 600 aa13.33□□□□□ -0.28
CCDC60-202ENST00000535685 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-202ENST00000535685 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.28
CCDC60-202ENST00000535685 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
CCDC60-202ENST00000535685 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-202ENST00000535685 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
CCDC60-202ENST00000535685 NOP58Q9Y2X3 529 aaKnown RBP13.33□□□□□ -0.28
CCDC60-202ENST00000535685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-202ENST00000535685 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC60-202ENST00000535685 IGSF3O75054 1194 aa13.32□□□□□ -0.28
CCDC60-202ENST00000535685 RLBP1P12271 317 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms