RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 ST18O60284 1047 aa27.3■■□□□ 1.96
RBFOX1-206ENST00000535565 PSMA5P28066 241 aa27.3■■□□□ 1.96
RBFOX1-206ENST00000535565 TM6SF1Q9BZW5 370 aa27.3■■□□□ 1.96
RBFOX1-206ENST00000535565 GAKO14976 1311 aa27.3■■□□□ 1.96
RBFOX1-206ENST00000535565 MYO3BQ8WXR4 1341 aa27.3■■□□□ 1.96
RBFOX1-206ENST00000535565 PRKAB2O43741 272 aa27.29■■□□□ 1.96
RBFOX1-206ENST00000535565 TDO2P48775 406 aa27.29■■□□□ 1.96
RBFOX1-206ENST00000535565 PPP4CP60510 307 aa27.29■■□□□ 1.96
RBFOX1-206ENST00000535565 JAKMIP1Q96N16 626 aaKnown RBP27.29■■□□□ 1.96
RBFOX1-206ENST00000535565 DAXXQ9UER7 740 aaPredicted RBP27.29■■□□□ 1.96
RBFOX1-206ENST00000535565 ZNF213O14771 459 aa27.28■■□□□ 1.96
RBFOX1-206ENST00000535565 PLCG2P16885 1265 aa27.28■■□□□ 1.96
RBFOX1-206ENST00000535565 HSCBQ8IWL3 235 aa27.28■■□□□ 1.96
RBFOX1-206ENST00000535565 SNX21Q969T3 373 aa27.28■■□□□ 1.96
RBFOX1-206ENST00000535565 GPR75-ASB3A0A0A6YYF3 556 aa27.27■■□□□ 1.96
RBFOX1-206ENST00000535565 BTDP43251 543 aa27.27■■□□□ 1.96
RBFOX1-206ENST00000535565 NEK4P51957 841 aa27.27■■□□□ 1.96
RBFOX1-206ENST00000535565 GIMAP6Q6P9H5 292 aa27.27■■□□□ 1.96
RBFOX1-206ENST00000535565 EPB41L4AQ9HCS5 686 aaPredicted RBP27.27■■□□□ 1.96
RBFOX1-206ENST00000535565 CDK5RAP2Q96SN8 1893 aa27.27■■□□□ 1.96
RBFOX1-206ENST00000535565 BAZ2AQ9UIF9 1905 aaKnown RBP27.27■■□□□ 1.96
RBFOX1-206ENST00000535565 CASTP20810 708 aaKnown RBP27.26■■□□□ 1.96
RBFOX1-206ENST00000535565 RASSF7Q02833 373 aa27.26■■□□□ 1.96
RBFOX1-206ENST00000535565 SDR42E1Q8WUS8 393 aa27.26■■□□□ 1.96
RBFOX1-206ENST00000535565 TEKT1Q969V4 418 aa27.26■■□□□ 1.96
RBFOX1-206ENST00000535565 GOLGB1Q14789 3259 aaKnown RBP27.26■■□□□ 1.95
RBFOX1-206ENST00000535565 RAD17O75943 681 aa27.26■■□□□ 1.95
RBFOX1-206ENST00000535565 ADCK5Q3MIX3 580 aa27.26■■□□□ 1.95
RBFOX1-206ENST00000535565 HHIPL2Q6UWX4 724 aa27.26■■□□□ 1.95
RBFOX1-206ENST00000535565 KIAA0825Q8IV33 1275 aa27.26■■□□□ 1.95
RBFOX1-206ENST00000535565 ATP8A2Q9NTI2 1148 aa27.26■■□□□ 1.95
RBFOX1-206ENST00000535565 DAGLAQ9Y4D2 1042 aa27.26■■□□□ 1.95
RBFOX1-206ENST00000535565 ADAMTSL1Q8N6G6 1762 aa27.25■■□□□ 1.95
RBFOX1-206ENST00000535565 HDLBPQ00341 1268 aaKnown RBP27.25■■□□□ 1.95
RBFOX1-206ENST00000535565 RSBN1LQ6PCB5 846 aaPredicted RBP27.25■■□□□ 1.95
RBFOX1-206ENST00000535565 NAV1Q8NEY1 1877 aa27.25■■□□□ 1.95
RBFOX1-206ENST00000535565 MRIQ9BWK5 157 aa27.25■■□□□ 1.95
RBFOX1-206ENST00000535565 UPF3BQ9BZI7 483 aaKnown RBP27.25■■□□□ 1.95
RBFOX1-206ENST00000535565 CYP46A1Q9Y6A2 500 aa27.25■■□□□ 1.95
RBFOX1-206ENST00000535565 LAMB1P07942 1786 aa27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 PSMD14O00487 310 aa27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 VIL1P09327 827 aaKnown RBP27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 SCNN1DP51172 638 aa27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 HAND2P61296 217 aa27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 SH3RF3Q8TEJ3 882 aaPredicted RBP27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 ZSWIM6Q9HCJ5 1215 aa27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 TAF6LQ9Y6J9 622 aa27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 DICER1Q9UPY3 1922 aaKnown RBP27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 FOCADQ5VW36 1801 aa27.24■■□□□ 1.95
RBFOX1-206ENST00000535565 USP5P45974 858 aa27.23■■□□□ 1.95
RBFOX1-206ENST00000535565 BLOC1S2Q6QNY1 142 aa27.23■■□□□ 1.95
RBFOX1-206ENST00000535565 ARHGAP27Q6ZUM4 889 aa27.23■■□□□ 1.95
RBFOX1-206ENST00000535565 TBC1D2Q9BYX2 928 aa27.23■■□□□ 1.95
RBFOX1-206ENST00000535565 ECM29Q5VYK3 1845 aa27.23■■□□□ 1.95
RBFOX1-206ENST00000535565 TIAM2Q8IVF5 1701 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 CRKP46108 304 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 RUFY3Q7L099 469 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 NEK1Q96PY6 1258 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 E7EWF7 191 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 HMGB1P09429 215 aaKnown RBP27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 TNIP1Q15025 636 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 CIAPIN1Q6FI81 312 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 SERPINA10Q9UK55 444 aa27.22■■□□□ 1.95
RBFOX1-206ENST00000535565 MCM2P49736 904 aa27.21■■□□□ 1.95
RBFOX1-206ENST00000535565 TEX11Q8IYF3 940 aa27.21■■□□□ 1.95
RBFOX1-206ENST00000535565 DCP1AQ9NPI6 582 aaPredicted RBP27.21■■□□□ 1.95
RBFOX1-206ENST00000535565 CXCL9Q07325 125 aa27.2■■□□□ 1.94
RBFOX1-206ENST00000535565 ZDHHC15Q96MV8 337 aa27.2■■□□□ 1.94
RBFOX1-206ENST00000535565 HDAC9Q9UKV0 1011 aa27.2■■□□□ 1.94
RBFOX1-206ENST00000535565 SBF1O95248 1867 aa27.2■■□□□ 1.94
RBFOX1-206ENST00000535565 STOX1Q6ZVD7 989 aa27.19■■□□□ 1.94
RBFOX1-206ENST00000535565 AGBL3Q8NEM8 1001 aa27.19■■□□□ 1.94
RBFOX1-206ENST00000535565 ARPP21Q9UBL0 812 aaPredicted RBP27.19■■□□□ 1.94
RBFOX1-206ENST00000535565 CD2BP2O95400 341 aaKnown RBP27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 RBM5P52756 815 aaKnown RBP eCLIP27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 EIF6P56537 245 aaKnown RBP27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 RHBDL3P58872 404 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 PDRG1Q9NUG6 133 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 LMNB1P20700 586 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 RPS6KB1P23443 525 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 PPARAQ07869 468 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 TRDNQ13061 729 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 AMOTL1Q8IY63 956 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 OGFOD1Q8N543 542 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 TGFBRAP1Q8WUH2 860 aa27.18■■□□□ 1.94
RBFOX1-206ENST00000535565 MYH1P12882 1939 aa27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 MINDY4BA8MYZ0 360 aa27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 K7ELQ4 463 aaPredicted RBP27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 CPA1P15085 419 aa27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 RALYLQ86SE5 291 aaKnown RBP27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 NCOA7Q8NI08 942 aa27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 TTC14Q96N46 770 aa27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 GMLQ99445 158 aa27.17■■□□□ 1.94
RBFOX1-206ENST00000535565 FZD9O00144 591 aa27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 PRELPP51888 382 aa27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 CTR9Q6PD62 1173 aa27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 TBC1D10CQ8IV04 446 aa27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 NBPF3Q9H094 633 aa27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 RNF41Q9H4P4 317 aaPredicted RBP27.16■■□□□ 1.94
RBFOX1-206ENST00000535565 MCM9Q9NXL9 1143 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms