RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 KIF18AQ8NI77 898 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 JAKMIP1Q96N16 626 aaKnown RBP10.52□□□□□ -0.73
SF3B2-216ENST00000534765 TCRBV5S4A2TA0A5A2 114 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 DDR1Q08345 913 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 ME3Q16798 604 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 GOLGA6L4A6NEF3 574 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 MNAT1P51948 309 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 TPM4P67936 248 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 PPP2R5AQ15172 486 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 CCDC186Q7Z3E2 898 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.73
SF3B2-216ENST00000534765 HSPD1P10809 573 aaKnown RBP10.51□□□□□ -0.73
SF3B2-216ENST00000534765 GYS1P13807 737 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 CASQ1P31415 396 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 GRIK5Q16478 980 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 HOMER1Q86YM7 354 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 IRS2Q9Y4H2 1338 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 MYO1CO00159 1063 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 GIMAP6Q6P9H5 292 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 CCDC34Q96HJ3 373 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 ZSWIM6Q9HCJ5 1215 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 JRKLQ9Y4A0 524 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 CHD4Q14839 1912 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 CUL4AQ13619 759 aa10.51□□□□□ -0.73
SF3B2-216ENST00000534765 BMS1Q14692 1282 aaKnown RBP10.51□□□□□ -0.73
SF3B2-216ENST00000534765 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 HAND2P61296 217 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 LRMPQ12912 555 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 CT47A1Q5JQC4 288 aaPredicted RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 GPATCH3Q96I76 525 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 GEMIN8Q9NWZ8 242 aaKnown RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 MINPP1Q9UNW1 487 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 ZSCAN26Q16670 478 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 DNAJC21Q5F1R6 531 aaKnown RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 RC3H1Q5TC82 1133 aaKnown RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 MNS1Q8NEH6 495 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 AK7Q96M32 723 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 SENP2Q9HC62 589 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 ZNF215Q9UL58 517 aaPredicted RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 PRKAB2O43741 272 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 TTC39AQ5SRH9 613 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 CEP135Q66GS9 1140 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 FILIP1Q7Z7B0 1213 aa10.5□□□□□ -0.73
SF3B2-216ENST00000534765 BAZ2AQ9UIF9 1905 aaKnown RBP10.5□□□□□ -0.73
SF3B2-216ENST00000534765 MCMDC2Q4G0Z9 681 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 TXLNBQ8N3L3 684 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 NCAPGQ9BPX3 1015 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 ARGLU1Q9NWB6 273 aaPredicted RBP10.49□□□□□ -0.73
SF3B2-216ENST00000534765 RTCBQ9Y3I0 505 aaKnown RBP10.49□□□□□ -0.73
SF3B2-216ENST00000534765 CTR9Q6PD62 1173 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 TMCO3Q6UWJ1 677 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 CLEC4GQ6UXB4 293 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 TFCP2L1Q9NZI6 479 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 CEP83Q9Y592 693 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 CENPFP49454 3210 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 SMTNL1A8MU46 457 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 ARID4AP29374 1257 aaPredicted RBP10.49□□□□□ -0.73
SF3B2-216ENST00000534765 ANAPC15P60006 121 aa10.49□□□□□ -0.73
SF3B2-216ENST00000534765 PTPN14Q15678 1187 aa10.48□□□□□ -0.73
SF3B2-216ENST00000534765 FAM177A1Q8N128 213 aaPredicted RBP10.48□□□□□ -0.73
SF3B2-216ENST00000534765 EPB41L4AQ9HCS5 686 aaPredicted RBP10.48□□□□□ -0.73
SF3B2-216ENST00000534765 RNF113AO15541 343 aaKnown RBP10.48□□□□□ -0.73
SF3B2-216ENST00000534765 SF3B3Q15393 1217 aaKnown RBP10.48□□□□□ -0.73
SF3B2-216ENST00000534765 TXNRD1Q16881 649 aa10.48□□□□□ -0.73
SF3B2-216ENST00000534765 PRR5LQ6MZQ0 368 aa10.48□□□□□ -0.73
SF3B2-216ENST00000534765 ADAMTSL1Q8N6G6 1762 aa10.48□□□□□ -0.73
SF3B2-216ENST00000534765 CAMK4Q16566 473 aa10.48□□□□□ -0.73
SF3B2-216ENST00000534765 PARP10Q53GL7 1025 aa10.48□□□□□ -0.73
SF3B2-216ENST00000534765 RAB11FIP4Q86YS3 637 aa10.48□□□□□ -0.73
SF3B2-216ENST00000534765 LTBP1Q14766 1721 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 CCDC172P0C7W6 258 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 STK3Q13188 491 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 PUM3Q15397 648 aaKnown RBP10.47□□□□□ -0.73
SF3B2-216ENST00000534765 SLC10A5Q5PT55 438 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 CCDC83Q8IWF9 413 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 ANKRD20A12PQ8NF67 263 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 ANKRD7Q92527 254 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 ZNF532Q9HCE3 1301 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 GADD45BO75293 160 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-216ENST00000534765 HSP90B1P14625 803 aaKnown RBP10.47□□□□□ -0.73
SF3B2-216ENST00000534765 NBPF5PQ86XG9 351 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-216ENST00000534765 RTL9Q8NET4 1388 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 FGAP02671 866 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 ADD2P35612 726 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 DHX8Q14562 1220 aaKnown RBP10.47□□□□□ -0.73
SF3B2-216ENST00000534765 KMT5BQ4FZB7 885 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 FBXO38Q6PIJ6 1188 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 COL23A1Q86Y22 540 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-216ENST00000534765 FAM84BQ96KN1 310 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-216ENST00000534765 SETDB2Q96T68 719 aa10.47□□□□□ -0.73
SF3B2-216ENST00000534765 ADRA2BP18089 450 aa10.46□□□□□ -0.73
SF3B2-216ENST00000534765 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-216ENST00000534765 CCDC152Q4G0S7 254 aa10.46□□□□□ -0.73
SF3B2-216ENST00000534765 SLC9C2Q5TAH2 1124 aa10.46□□□□□ -0.73
SF3B2-216ENST00000534765 CCDC91Q7Z6B0 441 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms