RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CNTNAP1P78357 1384 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
VPS11-205ENST00000534551 MYO1BO43795 1136 aa17.09■□□□□ 0.33
VPS11-205ENST00000534551 MAP4K4O95819 1239 aaPredicted RBP17.09■□□□□ 0.33
VPS11-205ENST00000534551 BTDP43251 543 aa17.09■□□□□ 0.33
VPS11-205ENST00000534551 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
VPS11-205ENST00000534551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.09■□□□□ 0.33
VPS11-205ENST00000534551 HAUS7Q99871 368 aa17.09■□□□□ 0.33
VPS11-205ENST00000534551 MYH1P12882 1939 aa17.08■□□□□ 0.33
VPS11-205ENST00000534551 NFIAQ12857 509 aa17.08■□□□□ 0.32
VPS11-205ENST00000534551 NAA16Q6N069 864 aaPredicted RBP17.08■□□□□ 0.32
VPS11-205ENST00000534551 MOB2Q70IA6 237 aa17.08■□□□□ 0.32
VPS11-205ENST00000534551 MAGEB6Q8N7X4 407 aa17.08■□□□□ 0.32
VPS11-205ENST00000534551 PI4K2BQ8TCG2 481 aa17.08■□□□□ 0.32
VPS11-205ENST00000534551 DEFB129Q9H1M3 183 aa17.08■□□□□ 0.32
VPS11-205ENST00000534551 TMEM88BA6NKF7 163 aa17.07■□□□□ 0.32
VPS11-205ENST00000534551 MX1P20591 662 aa17.07■□□□□ 0.32
VPS11-205ENST00000534551 RASA3Q14644 834 aa17.07■□□□□ 0.32
VPS11-205ENST00000534551 TMEM39BQ9GZU3 492 aa17.07■□□□□ 0.32
VPS11-205ENST00000534551 PAG1Q9NWQ8 432 aa17.07■□□□□ 0.32
VPS11-205ENST00000534551 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
VPS11-205ENST00000534551 NUCB1Q02818 461 aa17.06■□□□□ 0.32
VPS11-205ENST00000534551 TCP10Q12799 353 aa17.06■□□□□ 0.32
VPS11-205ENST00000534551 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
VPS11-205ENST00000534551 GPATCH3Q96I76 525 aa17.06■□□□□ 0.32
VPS11-205ENST00000534551 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
VPS11-205ENST00000534551 USP40Q9NVE5 1235 aa17.06■□□□□ 0.32
VPS11-205ENST00000534551 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
VPS11-205ENST00000534551 THSD7BQ9C0I4 1608 aa17.06■□□□□ 0.32
VPS11-205ENST00000534551 CYP7A1P22680 504 aa17.05■□□□□ 0.32
VPS11-205ENST00000534551 RHBDL3P58872 404 aa17.05■□□□□ 0.32
VPS11-205ENST00000534551 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
VPS11-205ENST00000534551 PRKG1Q13976 671 aa17.05■□□□□ 0.32
VPS11-205ENST00000534551 NBPF12Q5TAG4 269 aaPredicted RBP17.05■□□□□ 0.32
VPS11-205ENST00000534551 MIGA1Q8NAN2 632 aa17.05■□□□□ 0.32
VPS11-205ENST00000534551 MRIQ9BWK5 157 aa17.05■□□□□ 0.32
VPS11-205ENST00000534551 DDX4Q9NQI0 724 aaKnown RBP17.05■□□□□ 0.32
VPS11-205ENST00000534551 TMOD2Q9NZR1 351 aa17.05■□□□□ 0.32
VPS11-205ENST00000534551 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
VPS11-205ENST00000534551 FAM198AQ9UFP1 575 aa17.05■□□□□ 0.32
VPS11-205ENST00000534551 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
VPS11-205ENST00000534551 ABT1Q9ULW3 272 aaKnown RBP17.05■□□□□ 0.32
VPS11-205ENST00000534551 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 PCNTO95613 3336 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
VPS11-205ENST00000534551 PDE6AP16499 860 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 PDE4AP27815 886 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 GSTO1P78417 241 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 SKAP1Q86WV1 359 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 ZFPM1Q8IX07 1006 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
VPS11-205ENST00000534551 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
VPS11-205ENST00000534551 TEPSINQ96N21 525 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 GBA2Q9HCG7 927 aaPredicted RBP17.04■□□□□ 0.32
VPS11-205ENST00000534551 ATAD5Q96QE3 1844 aa17.04■□□□□ 0.32
VPS11-205ENST00000534551 SLURP2P0DP57 97 aa17.03■□□□□ 0.32
VPS11-205ENST00000534551 RGS3P49796 1198 aa17.03■□□□□ 0.32
VPS11-205ENST00000534551 PDE1AP54750 535 aa17.03■□□□□ 0.32
VPS11-205ENST00000534551 MAP3K12Q12852 859 aa17.03■□□□□ 0.32
VPS11-205ENST00000534551 PICALMQ13492 652 aa17.03■□□□□ 0.32
VPS11-205ENST00000534551 SLF2Q8IX21 1173 aa17.03■□□□□ 0.32
VPS11-205ENST00000534551 ZNF532Q9HCE3 1301 aa17.02■□□□□ 0.32
VPS11-205ENST00000534551 TCRBV5S4A2TA0A5A2 114 aa17.02■□□□□ 0.32
VPS11-205ENST00000534551 NEFLP07196 543 aa17.02■□□□□ 0.32
VPS11-205ENST00000534551 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
VPS11-205ENST00000534551 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
VPS11-205ENST00000534551 TLL2Q9Y6L7 1015 aa17.02■□□□□ 0.32
VPS11-205ENST00000534551 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.31
VPS11-205ENST00000534551 GLRX3O76003 335 aaKnown RBP17.01■□□□□ 0.31
VPS11-205ENST00000534551 LDHCP07864 332 aa17.01■□□□□ 0.31
VPS11-205ENST00000534551 ADD2P35612 726 aa17.01■□□□□ 0.31
VPS11-205ENST00000534551 TTLL12Q14166 644 aaPredicted RBP17.01■□□□□ 0.31
VPS11-205ENST00000534551 SLC9C2Q5TAH2 1124 aa17.01■□□□□ 0.31
VPS11-205ENST00000534551 SAPCD2Q86UD0 394 aa17.01■□□□□ 0.31
VPS11-205ENST00000534551 PPP2R3BQ9Y5P8 575 aa17.01■□□□□ 0.31
VPS11-205ENST00000534551 LAMB1P07942 1786 aa17.01■□□□□ 0.31
VPS11-205ENST00000534551 TNNI2P48788 182 aa17■□□□□ 0.31
VPS11-205ENST00000534551 HUNKP57058 714 aa17■□□□□ 0.31
VPS11-205ENST00000534551 GRM1Q13255 1194 aa17■□□□□ 0.31
VPS11-205ENST00000534551 DOCK1Q14185 1865 aa17■□□□□ 0.31
VPS11-205ENST00000534551 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
VPS11-205ENST00000534551 SH3BP5LQ7L8J4 393 aa17■□□□□ 0.31
VPS11-205ENST00000534551 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
VPS11-205ENST00000534551 TEX11Q8IYF3 940 aa17■□□□□ 0.31
VPS11-205ENST00000534551 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
VPS11-205ENST00000534551 STAP2Q9UGK3 403 aa17■□□□□ 0.31
VPS11-205ENST00000534551 MYH8P13535 1937 aa17■□□□□ 0.31
VPS11-205ENST00000534551 UBE2Q2LH0YL09 131 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 ERC2O15083 957 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 SLC4A8Q2Y0W8 1093 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 CYP4F22Q6NT55 531 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 FAM83AQ86UY5 434 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 LCORLQ8N3X6 602 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 DNAJC5GQ8N7S2 189 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 KBTBD3Q8NAB2 608 aa16.99■□□□□ 0.31
VPS11-205ENST00000534551 RIOK1Q9BRS2 568 aaKnown RBP16.99■□□□□ 0.31
VPS11-205ENST00000534551 NOL10Q9BSC4 688 aaKnown RBP16.99■□□□□ 0.31
VPS11-205ENST00000534551 ANGEL1Q9UNK9 670 aaKnown RBP16.99■□□□□ 0.31
VPS11-205ENST00000534551 ATRNL1Q5VV63 1379 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms