RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 KRT32Q14532 448 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 ANKRD1Q15327 319 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 TSHZ3Q63HK5 1081 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 TXNRD3Q86VQ6 643 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 COA1Q9GZY4 146 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 AKAP2Q9Y2D5 859 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 LEMD3Q9Y2U8 911 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
NCAPD3-212ENST00000534290 PDE4DIPQ5VU43 2346 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 GPR25O00155 361 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 SASH1O94885 1247 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 PTPN12Q05209 780 aaKnown RBP12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 FSD1Q9BTV5 496 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 SH2B1Q9NRF2 756 aaPredicted RBP12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 ATP6V1DQ9Y5K8 247 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
NCAPD3-212ENST00000534290 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.36
NCAPD3-212ENST00000534290 CIAO1O76071 339 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 IGHMBP2P38935 993 aaKnown RBP12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 MRE11P49959 708 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 PRKG1Q13976 671 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 ARMC9Q7Z3E5 817 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 ANP32BQ92688 251 aaKnown RBP12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 EAF2Q96CJ1 260 aaPredicted RBP12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 KAZALD1Q96I82 304 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 ANKRD2Q9GZV1 360 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 LSG1Q9H089 658 aaKnown RBP12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 LIMCH1Q9UPQ0 1083 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 CENPFP49454 3210 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 MKI67P46013 3256 aaKnown RBP12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.37
NCAPD3-212ENST00000534290 CD2BP2O95400 341 aaKnown RBP12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 BAG4O95429 457 aaKnown RBP12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 GTF2IP78347 998 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 LDLRAD1Q5T700 205 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 VPS53Q5VIR6 699 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 PRPF38BQ5VTL8 546 aaKnown RBP12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 MPHOSPH8Q99549 860 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 CCDC8Q9H0W5 538 aaPredicted RBP12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 SIL1Q9H173 461 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 SNRKQ9NRH2 765 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 CHMP3Q9Y3E7 222 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
NCAPD3-212ENST00000534290 FKTNO75072 461 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 ITGA6P23229 1130 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 KLRK1P26718 216 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 FBXO46Q6PJ61 603 aaPredicted RBP12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 LMBR1LQ6UX01 489 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 KCNB2Q92953 911 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 R3HDMLQ9H3Y0 253 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 ANGEL1Q9UNK9 670 aaKnown RBP12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 DDX49Q9Y6V7 483 aaKnown RBP12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 HTTP42858 3142 aa12.75□□□□□ -0.37
NCAPD3-212ENST00000534290 MBD3O95983 291 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 CSF1RP07333 972 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 KLHL40Q2TBA0 621 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 CCDC158Q5M9N0 1113 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 SPRYD7Q5W111 196 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 MAP4K1Q92918 833 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 ZBED3Q96IU2 234 aaPredicted RBP12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 PLA2G12BQ9BX93 195 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 CFHR5Q9BXR6 569 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 DEFB129Q9H1M3 183 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 ALDH8A1Q9H2A2 487 aaPredicted RBP12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 CEP126Q9P2H0 1117 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 FZD1Q9UP38 647 aa12.74□□□□□ -0.37
NCAPD3-212ENST00000534290 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 EYA2O00167 538 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 CYP2E1P05181 493 aaPredicted RBP12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 HMGB1P09429 215 aaKnown RBP12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 CASP7P55210 303 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 INHBEP58166 350 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 TFCP2Q12800 502 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 HAUS7Q99871 368 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 CD209Q9NNX6 404 aa12.73□□□□□ -0.37
NCAPD3-212ENST00000534290 PDRG1Q9NUG6 133 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms