RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 TLR7Q9NYK1 1049 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-218ENST00000533761 KLRK1P26718 216 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 GYG1P46976 350 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 FAM84BQ96KN1 310 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 BOLA2Q9H3K6 86 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 AK9Q5TCS8 1911 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 IRS2Q9Y4H2 1338 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 EPB41L2O43491 1005 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 MFAP1P55081 439 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 TTF1Q15361 905 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
CCDC90B-218ENST00000533761 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 ADORA1P30542 326 aa13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 BCAMP50895 628 aa13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 DBNDD1Q9H9R9 158 aa13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 CD209Q9NNX6 404 aa13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 RNF181Q9P0P0 153 aa13.19□□□□□ -0.3
CCDC90B-218ENST00000533761 SBF1O95248 1867 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 RAD50Q92878 1312 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 ECE2O60344 883 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 MCCP23508 829 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 CHMLP26374 656 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 PRELPP51888 382 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 CCDC102BQ68D86 513 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 PAG1Q9NWQ8 432 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 CCDC88AQ3V6T2 1871 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 ARAP2Q8WZ64 1704 aa13.18□□□□□ -0.3
CCDC90B-218ENST00000533761 IL1R1P14778 569 aa13.17□□□□□ -0.3
CCDC90B-218ENST00000533761 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
CCDC90B-218ENST00000533761 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
CCDC90B-218ENST00000533761 ZC3H4Q9UPT8 1303 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 CHD4Q14839 1912 aa13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 FZD9O00144 591 aa13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 SEMA3EO15041 775 aa13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 PHKA1P46020 1223 aa13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 TDRD7Q8NHU6 1098 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 ESYT1Q9BSJ8 1104 aa13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 C22orf23Q9BZE7 217 aa13.16□□□□□ -0.3
CCDC90B-218ENST00000533761 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 ZNF787Q6DD87 383 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 TBC1D32Q96NH3 1257 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 USP17L3A6NCW0 530 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 USP17L4A6NCW7 530 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 GOLIM4O00461 696 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 IGSF3O75054 1194 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 TNIP1Q15025 636 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 IQSEC3Q9UPP2 1182 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-218ENST00000533761 SOWAHBA6NEL2 793 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 RAD17O75943 681 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 GTF2IP78347 998 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 CXCL9Q07325 125 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 STRIP1Q5VSL9 837 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 RABGEF1Q9UJ41 708 aa13.14□□□□□ -0.31
CCDC90B-218ENST00000533761 COL4A5P29400 1685 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 RASGRF1Q13972 1273 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 FAM205AQ6ZU69 1335 aa13.13□□□□□ -0.31
CCDC90B-218ENST00000533761 SGSM2O43147 1006 aa13.12□□□□□ -0.31
CCDC90B-218ENST00000533761 MAP3K12Q12852 859 aa13.12□□□□□ -0.31
CCDC90B-218ENST00000533761 GPC2Q8N158 579 aa13.12□□□□□ -0.31
CCDC90B-218ENST00000533761 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
CCDC90B-218ENST00000533761 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
CCDC90B-218ENST00000533761 VIL1P09327 827 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 MCAMP43121 646 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 CHAF1AQ13111 956 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 HELLSQ9NRZ9 838 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 PSMD14O00487 310 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 FKBP1AP62942 108 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms