RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 TIGD1Q96MW7 591 aa13.91□□□□□ -0.18
ATM-222ENST00000533733 GNL3LQ9NVN8 582 aaKnown RBP13.91□□□□□ -0.18
ATM-222ENST00000533733 MYH6P13533 1939 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 ZBTB22O15209 634 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 PPP6R2O75170 966 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 ZNF75DP51815 510 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
ATM-222ENST00000533733 TRIM29Q14134 588 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
ATM-222ENST00000533733 AKNAD1Q5T1N1 836 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
ATM-222ENST00000533733 LUZP1Q86V48 1076 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 FMR1NBQ8N0W7 255 aaPredicted RBP13.9□□□□□ -0.18
ATM-222ENST00000533733 STAG1Q8WVM7 1258 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 MRFAP1L1Q96HT8 127 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 MAP7D2Q96T17 732 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 BPIFA3Q9BQP9 254 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 TRIM5Q9C035 493 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 NBPF3Q9H094 633 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 PCDHA7Q9UN72 937 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 PCP11498 1178 aaKnown RBP13.9□□□□□ -0.18
ATM-222ENST00000533733 CEBPZQ03701 1054 aaKnown RBP13.9□□□□□ -0.18
ATM-222ENST00000533733 RASGRF1Q13972 1273 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 ANO1Q5XXA6 986 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 MFSD6Q6ZSS7 791 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 MAGEB6Q8N7X4 407 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 KIAA1524Q8TCG1 905 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 DNAJC25Q9H1X3 360 aa13.9□□□□□ -0.18
ATM-222ENST00000533733 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
ATM-222ENST00000533733 BCL9LQ86UU0 1499 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 LTBP4Q8N2S1 1624 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 MAST2Q6P0Q8 1798 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 DLEC1Q9Y238 1755 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 CCDC69A6NI79 296 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 BECN2A8MW95 431 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 CMA1P23946 247 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 IARSP41252 1262 aaKnown RBP13.89□□□□□ -0.19
ATM-222ENST00000533733 UBE4AQ14139 1066 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 IQCB1Q15051 598 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 NOL10Q9BSC4 688 aaKnown RBP13.89□□□□□ -0.19
ATM-222ENST00000533733 ALG1Q9BT22 464 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 GOLPH3LQ9H4A5 285 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 COL24A1Q17RW2 1714 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
ATM-222ENST00000533733 ZNF804BA4D1E1 1349 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 CCDC88AQ3V6T2 1871 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 ERICH2A1L162 156 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 GOLGA8AA7E2F4 631 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 AP5Z1O43299 807 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 MBD4O95243 580 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 NT5C2P49902 561 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
ATM-222ENST00000533733 GUCY1B3Q02153 619 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 SF3B3Q15393 1217 aaKnown RBP13.88□□□□□ -0.19
ATM-222ENST00000533733 DNTTIP2Q5QJE6 756 aaKnown RBP13.88□□□□□ -0.19
ATM-222ENST00000533733 NFXL1Q6ZNB6 911 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 TTC12Q9H892 705 aaPredicted RBP13.88□□□□□ -0.19
ATM-222ENST00000533733 LY9Q9HBG7 655 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 GPHNQ9NQX3 736 aaPredicted RBP13.88□□□□□ -0.19
ATM-222ENST00000533733 SLC12A7Q9Y666 1083 aa13.88□□□□□ -0.19
ATM-222ENST00000533733 PDS5AQ29RF7 1337 aaKnown RBP13.88□□□□□ -0.19
ATM-222ENST00000533733 B4E1Z4 1266 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 SEMA3EO15041 775 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 IFNAR1P17181 557 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.194e-10■■■■□ 21.3
ATM-222ENST00000533733 TPM4P67936 248 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 CHAF1AQ13111 956 aaPredicted RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 DRC7Q8IY82 874 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 ELOA2Q8IYF1 753 aaPredicted RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 MARCH10Q8NA82 808 aaPredicted RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 ANAPC4Q9UJX5 808 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 FAM237AA0A1B0GTK4 181 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 IFIT3O14879 490 aaKnown RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 TDO2P48775 406 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 FOSBP53539 338 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 CHRNDQ07001 517 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 GNL2Q13823 731 aaKnown RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 SAFBQ15424 915 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATM-222ENST00000533733 NTRK3Q16288 839 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 KRT40Q6A162 431 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 TRIM22Q8IYM9 498 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 EPB41L4AQ9HCS5 686 aaPredicted RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.87□□□□□ -0.19
ATM-222ENST00000533733 KIAA1468Q9P260 1216 aa13.87□□□□□ -0.19
ATM-222ENST00000533733 NEDD4P46934 1319 aa13.86□□□□□ -0.19
ATM-222ENST00000533733 UQCRHLA0A096LP55 91 aa13.86□□□□□ -0.19
ATM-222ENST00000533733 MYO1BO43795 1136 aa13.86□□□□□ -0.19
ATM-222ENST00000533733 FMNL1O95466 1100 aaPredicted RBP13.86□□□□□ -0.19
ATM-222ENST00000533733 UQCRHP07919 91 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms