RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 TSPYL4Q9UJ04 414 aa9.89□□□□□ -0.83
CASP4-212ENST00000533730 RTCBQ9Y3I0 505 aaKnown RBP9.89□□□□□ -0.83
CASP4-212ENST00000533730 COL5A3P25940 1745 aaPredicted RBP9.89□□□□□ -0.83
CASP4-212ENST00000533730 PNPLA7Q6ZV29 1317 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 TJP1Q07157 1748 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 RPS6KA4O75676 772 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 CRKLP46109 303 aaKnown RBP9.88□□□□□ -0.83
CASP4-212ENST00000533730 CBLBQ13191 982 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 TSNAXIP1Q2TAA8 658 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 DNAJC10Q8IXB1 793 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 MEIOBQ8N635 442 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
CASP4-212ENST00000533730 CCDC87Q9NVE4 849 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 KDM3BQ7LBC6 1761 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 CASZ1Q86V15 1759 aa9.88□□□□□ -0.83
CASP4-212ENST00000533730 CHL1O00533 1208 aa9.87□□□□□ -0.83
CASP4-212ENST00000533730 CYP19A1P11511 503 aaPredicted RBP9.87□□□□□ -0.83
CASP4-212ENST00000533730 GNAI1P63096 354 aa9.87□□□□□ -0.83
CASP4-212ENST00000533730 FKBP5Q13451 457 aaPredicted RBP9.87□□□□□ -0.83
CASP4-212ENST00000533730 KDF1Q8NAX2 398 aaPredicted RBP9.87□□□□□ -0.83
CASP4-212ENST00000533730 MTFR1LQ9H019 292 aa9.87□□□□□ -0.83
CASP4-212ENST00000533730 SPON1Q9HCB6 807 aa9.87□□□□□ -0.83
CASP4-212ENST00000533730 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
CASP4-212ENST00000533730 IFT57Q9NWB7 429 aa9.87□□□□□ -0.83
CASP4-212ENST00000533730 LRP5O75197 1615 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 KCNQ3O43525 872 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 WEE1P30291 646 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 EIF4A1P60842 406 aaKnown RBP9.86□□□□□ -0.83
CASP4-212ENST00000533730 EAPPQ56P03 285 aaPredicted RBP9.86□□□□□ -0.83
CASP4-212ENST00000533730 TRAPPC3LQ5T215 181 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 CC2D2BQ6DHV5 1058 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 UBR3Q6ZT12 1888 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 TRIM46Q7Z4K8 759 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 TSEN2Q8NCE0 465 aaKnown RBP9.86□□□□□ -0.83
CASP4-212ENST00000533730 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 TUBGCP6Q96RT7 1819 aa9.86□□□□□ -0.83
CASP4-212ENST00000533730 IL16Q14005 1332 aa9.85□□□□□ -0.83
CASP4-212ENST00000533730 COL19A1Q14993 1142 aa9.85□□□□□ -0.83
CASP4-212ENST00000533730 INTS5Q6P9B9 1019 aaKnown RBP9.85□□□□□ -0.83
CASP4-212ENST00000533730 COL23A1Q86Y22 540 aaPredicted RBP9.85□□□□□ -0.83
CASP4-212ENST00000533730 WDR63Q8IWG1 891 aa9.85□□□□□ -0.83
CASP4-212ENST00000533730 RGL4Q8IZJ4 473 aa9.85□□□□□ -0.83
CASP4-212ENST00000533730 CHMP4AQ9BY43 222 aa9.85□□□□□ -0.83
CASP4-212ENST00000533730 OSBPL3Q9H4L5 887 aa9.85□□□□□ -0.83
CASP4-212ENST00000533730 LAS1LQ9Y4W2 734 aaKnown RBP9.85□□□□□ -0.83
CASP4-212ENST00000533730 A0A087WZG4 1122 aa9.84□□□□□ -0.83
CASP4-212ENST00000533730 ZBTB7AO95365 584 aa9.84□□□□□ -0.83
CASP4-212ENST00000533730 HOXB7P09629 217 aa9.84□□□□□ -0.83
CASP4-212ENST00000533730 ZNF853P0CG23 659 aa9.84□□□□□ -0.83
CASP4-212ENST00000533730 CDK11BP21127 795 aaKnown RBP9.84□□□□□ -0.83
CASP4-212ENST00000533730 POLD1P28340 1107 aa9.84□□□□□ -0.83
CASP4-212ENST00000533730 RFC4P35249 363 aa9.84□□□□□ -0.83
CASP4-212ENST00000533730 IL6STP40189 918 aaPredicted RBP9.84□□□□□ -0.83
CASP4-212ENST00000533730 NAALADL2Q58DX5 795 aa9.84□□□□□ -0.83
CASP4-212ENST00000533730 SOS1Q07889 1333 aaPredicted RBP9.83□□□□□ -0.84
CASP4-212ENST00000533730 ERBB4Q15303 1308 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 LAMB4A4D0S4 1761 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 MYH14Q7Z406 1995 aaKnown RBP9.83□□□□□ -0.84
CASP4-212ENST00000533730 ADH1AP07327 375 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 BMP1P13497 986 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 CANXP27824 592 aaKnown RBP9.83□□□□□ -0.84
CASP4-212ENST00000533730 USP4Q13107 963 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 NAA30Q147X3 362 aaPredicted RBP9.83□□□□□ -0.84
CASP4-212ENST00000533730 MRPL14Q6P1L8 145 aaKnown RBP9.83□□□□□ -0.84
CASP4-212ENST00000533730 PDGFDQ9GZP0 370 aaPredicted RBP9.83□□□□□ -0.84
CASP4-212ENST00000533730 ATP13A2Q9NQ11 1180 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 ZBTB1Q9Y2K1 713 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 USP16Q9Y5T5 823 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 COL15A1P39059 1388 aa9.83□□□□□ -0.84
CASP4-212ENST00000533730 P4HBP07237 508 aaKnown RBP9.82□□□□□ -0.84
CASP4-212ENST00000533730 EIF5P55010 431 aaKnown RBP9.82□□□□□ -0.84
CASP4-212ENST00000533730 AMIGO3Q86WK7 504 aa9.82□□□□□ -0.84
CASP4-212ENST00000533730 NLGN1Q8N2Q7 840 aa9.82□□□□□ -0.84
CASP4-212ENST00000533730 BACH2Q9BYV9 841 aa9.82□□□□□ -0.84
CASP4-212ENST00000533730 BCL11AQ9H165 835 aa9.82□□□□□ -0.84
CASP4-212ENST00000533730 MBIPQ9NS73 344 aa9.82□□□□□ -0.84
CASP4-212ENST00000533730 A1BGP04217 495 aa9.81□□□□□ -0.84
CASP4-212ENST00000533730 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
CASP4-212ENST00000533730 AGBL1Q96MI9 1066 aa9.81□□□□□ -0.84
CASP4-212ENST00000533730 TSEN34Q9BSV6 310 aaKnown RBP9.81□□□□□ -0.84
CASP4-212ENST00000533730 MYH16Q9H6N6 1097 aa9.81□□□□□ -0.84
CASP4-212ENST00000533730 PPP1R1BQ9UD71 204 aaPredicted RBP9.81□□□□□ -0.84
CASP4-212ENST00000533730 NARFQ9UHQ1 456 aa9.81□□□□□ -0.84
CASP4-212ENST00000533730 USP42Q9H9J4 1324 aaKnown RBP9.81□□□□□ -0.84
CASP4-212ENST00000533730 C4AP0C0L4 1744 aa9.8□□□□□ -0.84
CASP4-212ENST00000533730 COL24A1Q17RW2 1714 aa9.8□□□□□ -0.84
CASP4-212ENST00000533730 PRAMEF22A3QJZ6 481 aa9.8□□□□□ -0.84
CASP4-212ENST00000533730 ERCC5P28715 1186 aaPredicted RBP9.8□□□□□ -0.84
CASP4-212ENST00000533730 TMC7Q7Z402 723 aa9.8□□□□□ -0.84
CASP4-212ENST00000533730 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
CASP4-212ENST00000533730 HELQQ8TDG4 1101 aa9.8□□□□□ -0.84
CASP4-212ENST00000533730 M0R2N6 131 aa9.79□□□□□ -0.84
CASP4-212ENST00000533730 MYCP01106 439 aaPredicted RBP9.79□□□□□ -0.84
CASP4-212ENST00000533730 GYS1P13807 737 aa9.79□□□□□ -0.84
CASP4-212ENST00000533730 MRPL58Q14197 206 aaKnown RBP9.79□□□□□ -0.84
CASP4-212ENST00000533730 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
CASP4-212ENST00000533730 SMIM5Q71RC9 77 aa9.79□□□□□ -0.84
CASP4-212ENST00000533730 ZNF652Q9Y2D9 606 aa9.79□□□□□ -0.84
CASP4-212ENST00000533730 ZNF521Q96K83 1311 aa9.79□□□□□ -0.84
CASP4-212ENST00000533730 SPINT1O43278 529 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms