RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 ANP32BQ92688 251 aaKnown RBP33.35■■■□□ 2.93
SAMD1-202ENST00000533683 CNNM2Q9H8M5 875 aa33.35■■■□□ 2.93
SAMD1-202ENST00000533683 SENP2Q9HC62 589 aa33.35■■■□□ 2.93
SAMD1-202ENST00000533683 ZSWIM5Q9P217 1185 aa33.35■■■□□ 2.93
SAMD1-202ENST00000533683 CPLX1O14810 134 aa33.34■■■□□ 2.93
SAMD1-202ENST00000533683 ADD1P35611 737 aaKnown RBP33.34■■■□□ 2.93
SAMD1-202ENST00000533683 GUCY1B3Q02153 619 aa33.34■■■□□ 2.93
SAMD1-202ENST00000533683 MFSD6Q6ZSS7 791 aa33.34■■■□□ 2.93
SAMD1-202ENST00000533683 ZNF384Q8TF68 577 aa33.34■■■□□ 2.93
SAMD1-202ENST00000533683 RIOK1Q9BRS2 568 aaKnown RBP33.34■■■□□ 2.93
SAMD1-202ENST00000533683 KDM4AO75164 1064 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 CCDC173Q0VFZ6 552 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 STAG1Q8WVM7 1258 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 APOA5Q6Q788 366 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 PPP1R9BQ96SB3 815 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 KRT23Q9C075 422 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 LY9Q9HBG7 655 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 ORC3Q9UBD5 711 aaPredicted RBP33.33■■■□□ 2.93
SAMD1-202ENST00000533683 CFAP45Q9UL16 551 aa33.33■■■□□ 2.93
SAMD1-202ENST00000533683 MYH15Q9Y2K3 1946 aa33.32■■■□□ 2.92
SAMD1-202ENST00000533683 PDS5AQ29RF7 1337 aaKnown RBP33.32■■■□□ 2.92
SAMD1-202ENST00000533683 SDR42E1Q8WUS8 393 aa33.32■■■□□ 2.92
SAMD1-202ENST00000533683 MYH13Q9UKX3 1938 aa33.31■■■□□ 2.92
SAMD1-202ENST00000533683 TMEM67Q5HYA8 995 aa33.31■■■□□ 2.92
SAMD1-202ENST00000533683 SLC27A3Q5K4L6 730 aa33.31■■■□□ 2.92
SAMD1-202ENST00000533683 KRT27Q7Z3Y8 459 aa33.31■■■□□ 2.92
SAMD1-202ENST00000533683 TXNRD3Q86VQ6 643 aa33.31■■■□□ 2.92
SAMD1-202ENST00000533683 SGMS1Q86VZ5 419 aa33.31■■■□□ 2.92
SAMD1-202ENST00000533683 RNF214Q8ND24 703 aa33.31■■■□□ 2.92
SAMD1-202ENST00000533683 BRWD3Q6RI45 1802 aa33.3■■■□□ 2.92
SAMD1-202ENST00000533683 GYS1P13807 737 aa33.3■■■□□ 2.92
SAMD1-202ENST00000533683 METAP2P50579 478 aaKnown RBP eCLIP33.3■■■□□ 2.92
SAMD1-202ENST00000533683 GRAPQ13588 217 aa33.3■■■□□ 2.92
SAMD1-202ENST00000533683 PRR5LQ6MZQ0 368 aa33.3■■■□□ 2.92
SAMD1-202ENST00000533683 GRAPLQ8TC17 118 aaPredicted RBP33.3■■■□□ 2.92
SAMD1-202ENST00000533683 IRS2Q9Y4H2 1338 aa33.3■■■□□ 2.92
SAMD1-202ENST00000533683 LIG1P18858 919 aa33.3■■■□□ 2.92
SAMD1-202ENST00000533683 GOLGA6L4A6NEF3 574 aa33.29■■■□□ 2.92
SAMD1-202ENST00000533683 TRIM37O94972 964 aa33.29■■■□□ 2.92
SAMD1-202ENST00000533683 LIFRP42702 1097 aa33.29■■■□□ 2.92
SAMD1-202ENST00000533683 PGBD1Q96JS3 809 aa33.29■■■□□ 2.92
SAMD1-202ENST00000533683 DYNLL1P63167 89 aaKnown RBP33.28■■■□□ 2.92
SAMD1-202ENST00000533683 ILDR1Q86SU0 546 aaPredicted RBP33.28■■■□□ 2.92
SAMD1-202ENST00000533683 SLC51AQ86UW1 340 aa33.28■■■□□ 2.92
SAMD1-202ENST00000533683 FAM43AQ8N2R8 423 aa33.28■■■□□ 2.92
SAMD1-202ENST00000533683 IFIT3O14879 490 aaKnown RBP33.28■■■□□ 2.92
SAMD1-202ENST00000533683 RXRAP19793 462 aa33.28■■■□□ 2.92
SAMD1-202ENST00000533683 PPARAQ07869 468 aa33.28■■■□□ 2.92
SAMD1-202ENST00000533683 NSUN4Q96CB9 384 aaKnown RBP33.28■■■□□ 2.92
SAMD1-202ENST00000533683 C8orf76Q96K31 380 aa33.28■■■□□ 2.92
SAMD1-202ENST00000533683 RRP12Q5JTH9 1297 aaKnown RBP33.27■■■□□ 2.92
SAMD1-202ENST00000533683 OTUD7BQ6GQQ9 843 aa33.27■■■□□ 2.92
SAMD1-202ENST00000533683 NFXL1Q6ZNB6 911 aa33.27■■■□□ 2.92
SAMD1-202ENST00000533683 GIMAP6Q6P9H5 292 aa33.27■■■□□ 2.92
SAMD1-202ENST00000533683 MICU3Q86XE3 530 aa33.27■■■□□ 2.92
SAMD1-202ENST00000533683 ZBTB43O43298 467 aa33.26■■■□□ 2.92
SAMD1-202ENST00000533683 CDC27P30260 824 aa33.26■■■□□ 2.92
SAMD1-202ENST00000533683 MECOMQ03112 1051 aa33.26■■■□□ 2.92
SAMD1-202ENST00000533683 STK11IPQ8N1F8 1099 aa33.26■■■□□ 2.92
SAMD1-202ENST00000533683 FBXO18Q8NFZ0 1043 aa33.26■■■□□ 2.92
SAMD1-202ENST00000533683 TOMM22Q9NS69 142 aa33.26■■■□□ 2.92
SAMD1-202ENST00000533683 CEBPZQ03701 1054 aaKnown RBP33.26■■■□□ 2.91
SAMD1-202ENST00000533683 CHAF1AQ13111 956 aaPredicted RBP33.26■■■□□ 2.91
SAMD1-202ENST00000533683 RNF41Q9H4P4 317 aaPredicted RBP33.26■■■□□ 2.91
SAMD1-202ENST00000533683 ANKIB1Q9P2G1 1089 aa33.26■■■□□ 2.91
SAMD1-202ENST00000533683 ATL3Q6DD88 541 aa33.25■■■□□ 2.91
SAMD1-202ENST00000533683 KLHL34Q8N239 644 aa33.25■■■□□ 2.91
SAMD1-202ENST00000533683 FTOQ9C0B1 505 aaKnown RBP eCLIP33.25■■■□□ 2.912e-7■■■□□ 18.1
SAMD1-202ENST00000533683 ANAPC4Q9UJX5 808 aa33.25■■■□□ 2.91
SAMD1-202ENST00000533683 MINDY4BA8MYZ0 360 aa33.24■■■□□ 2.91
SAMD1-202ENST00000533683 RCOR1Q9UKL0 485 aa33.24■■■□□ 2.91
SAMD1-202ENST00000533683 USP28Q96RU2 1077 aa33.24■■■□□ 2.91
SAMD1-202ENST00000533683 CCDC144CPQ8IYA2 1237 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 ZNF396Q96N95 335 aaPredicted RBP33.23■■■□□ 2.91
SAMD1-202ENST00000533683 FUCA2Q9BTY2 467 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 MYL10Q9BUA6 226 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 SLC12A7Q9Y666 1083 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 CDKL5O76039 1030 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 SERPINB2P05120 415 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 PRDX5P30044 214 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 BRIP1Q9BX63 1249 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 GJB4Q9NTQ9 266 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 FAM217BQ9NTX9 383 aaPredicted RBP33.23■■■□□ 2.91
SAMD1-202ENST00000533683 LEMD3Q9Y2U8 911 aa33.23■■■□□ 2.91
SAMD1-202ENST00000533683 ZBTB22O15209 634 aa33.22■■■□□ 2.91
SAMD1-202ENST00000533683 TRIM44Q96DX7 344 aaPredicted RBP33.22■■■□□ 2.91
SAMD1-202ENST00000533683 ZKSCAN3Q9BRR0 538 aa33.22■■■□□ 2.91
SAMD1-202ENST00000533683 DACT1Q9NYF0 836 aa33.22■■■□□ 2.91
SAMD1-202ENST00000533683 CCDC69A6NI79 296 aa33.21■■■□□ 2.91
SAMD1-202ENST00000533683 GOLGA8AA7E2F4 631 aa33.21■■■□□ 2.91
SAMD1-202ENST00000533683 SMIM22K7EJ46 135 aa33.21■■■□□ 2.91
SAMD1-202ENST00000533683 AEBP2Q6ZN18 517 aaPredicted RBP33.21■■■□□ 2.91
SAMD1-202ENST00000533683 NTRK3Q16288 839 aa33.21■■■□□ 2.91
SAMD1-202ENST00000533683 CRY2Q49AN0 593 aa33.21■■■□□ 2.91
SAMD1-202ENST00000533683 CPLX2Q6PUV4 134 aaKnown RBP33.21■■■□□ 2.91
SAMD1-202ENST00000533683 RPGRQ92834 1020 aaKnown RBP33.21■■■□□ 2.91
SAMD1-202ENST00000533683 BAZ2AQ9UIF9 1905 aaKnown RBP33.21■■■□□ 2.91
SAMD1-202ENST00000533683 SART3Q15020 963 aaKnown RBP33.2■■■□□ 2.91
SAMD1-202ENST00000533683 BICD2Q8TD16 824 aa33.2■■■□□ 2.91
SAMD1-202ENST00000533683 PDLIM2Q96JY6 352 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms