RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 POTEIP0CG38 1075 aa21.06■□□□□ 0.96
NXF1-216ENST00000533499 POTEJP0CG39 1038 aa21.06■□□□□ 0.96
NXF1-216ENST00000533499 DYNLL1P63167 89 aaKnown RBP21.06■□□□□ 0.96
NXF1-216ENST00000533499 ANGEL2Q5VTE6 544 aaKnown RBP21.06■□□□□ 0.96
NXF1-216ENST00000533499 DIAPH3Q9NSV4 1193 aa21.06■□□□□ 0.96
NXF1-216ENST00000533499 GGA3Q9NZ52 723 aa21.06■□□□□ 0.96
NXF1-216ENST00000533499 SCAF8Q9UPN6 1271 aaKnown RBP21.06■□□□□ 0.96
NXF1-216ENST00000533499 GAKO14976 1311 aa21.05■□□□□ 0.96
NXF1-216ENST00000533499 MAGEB6P1A0A0J9YX57 407 aa21.05■□□□□ 0.96
NXF1-216ENST00000533499 CACNB3P54284 484 aa21.05■□□□□ 0.96
NXF1-216ENST00000533499 APOBEC3HQ6NTF7 200 aaKnown RBP21.05■□□□□ 0.96
NXF1-216ENST00000533499 MTMR14Q8NCE2 650 aa21.05■□□□□ 0.96
NXF1-216ENST00000533499 DCPSQ96C86 337 aaKnown RBP21.05■□□□□ 0.96
NXF1-216ENST00000533499 GPR75-ASB3A0A0A6YYF3 556 aa21.04■□□□□ 0.96
NXF1-216ENST00000533499 IGSF3O75054 1194 aa21.04■□□□□ 0.96
NXF1-216ENST00000533499 UBE3CQ15386 1083 aa21.04■□□□□ 0.96
NXF1-216ENST00000533499 CDC42EP5Q6NZY7 148 aa21.04■□□□□ 0.96
NXF1-216ENST00000533499 FAM163AQ96GL9 167 aaPredicted RBP21.04■□□□□ 0.96
NXF1-216ENST00000533499 ZNF70Q9UC06 446 aaPredicted RBP21.04■□□□□ 0.96
NXF1-216ENST00000533499 TCRBV5S4A2TA0A5A2 114 aa21.03■□□□□ 0.96
NXF1-216ENST00000533499 TCP10L2B9ZVM9 353 aa21.03■□□□□ 0.96
NXF1-216ENST00000533499 MBD4O95243 580 aa21.03■□□□□ 0.96
NXF1-216ENST00000533499 BMP2KLQ5H9B9 411 aa21.03■□□□□ 0.96
NXF1-216ENST00000533499 TEX11Q8IYF3 940 aa21.03■□□□□ 0.96
NXF1-216ENST00000533499 SH3RF3Q8TEJ3 882 aaPredicted RBP21.03■□□□□ 0.96
NXF1-216ENST00000533499 AIDAQ96BJ3 306 aa21.03■□□□□ 0.96
NXF1-216ENST00000533499 ZBED3Q96IU2 234 aaPredicted RBP21.03■□□□□ 0.96
NXF1-216ENST00000533499 ARMT1Q9H993 441 aa21.03■□□□□ 0.96
NXF1-216ENST00000533499 KIF3CO14782 793 aa21.02■□□□□ 0.96
NXF1-216ENST00000533499 NMIQ13287 307 aaPredicted RBP21.02■□□□□ 0.96
NXF1-216ENST00000533499 PICALMQ13492 652 aa21.02■□□□□ 0.96
NXF1-216ENST00000533499 SPDYE2Q495Y8 402 aa21.02■□□□□ 0.96
NXF1-216ENST00000533499 MAP1SQ66K74 1059 aaPredicted RBP21.02■□□□□ 0.96
NXF1-216ENST00000533499 LDHDQ86WU2 507 aa21.02■□□□□ 0.96
NXF1-216ENST00000533499 APPBP2Q92624 585 aa21.02■□□□□ 0.96
NXF1-216ENST00000533499 HIP1O00291 1037 aa21.01■□□□□ 0.95
NXF1-216ENST00000533499 PLCG2P16885 1265 aa21.01■□□□□ 0.95
NXF1-216ENST00000533499 TMED8Q6PL24 325 aaPredicted RBP21.01■□□□□ 0.95
NXF1-216ENST00000533499 CWC27Q6UX04 472 aaKnown RBP21.01■□□□□ 0.95
NXF1-216ENST00000533499 SULF1Q8IWU6 871 aa21.01■□□□□ 0.95
NXF1-216ENST00000533499 LCORLQ8N3X6 602 aa21.01■□□□□ 0.95
NXF1-216ENST00000533499 FAM227BQ96M60 508 aa21.01■□□□□ 0.95
NXF1-216ENST00000533499 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
NXF1-216ENST00000533499 PUS7LQ9H0K6 701 aaKnown RBP21.01■□□□□ 0.95
NXF1-216ENST00000533499 POLR2AP24928 1970 aaKnown RBP21.01■□□□□ 0.95
NXF1-216ENST00000533499 M0R2C6 588 aa21■□□□□ 0.95
NXF1-216ENST00000533499 USP5P45974 858 aa21■□□□□ 0.95
NXF1-216ENST00000533499 TCP10Q12799 353 aa21■□□□□ 0.95
NXF1-216ENST00000533499 ZMYM1Q5SVZ6 1142 aa21■□□□□ 0.95
NXF1-216ENST00000533499 OSBP2Q969R2 916 aa21■□□□□ 0.95
NXF1-216ENST00000533499 PPP4CP60510 307 aa20.99■□□□□ 0.95
NXF1-216ENST00000533499 CHADLQ6NUI6 762 aa20.99■□□□□ 0.95
NXF1-216ENST00000533499 CCDC129Q6ZRS4 1044 aa20.99■□□□□ 0.95
NXF1-216ENST00000533499 KRT26Q7Z3Y9 468 aa20.99■□□□□ 0.95
NXF1-216ENST00000533499 USP48Q86UV5 1035 aa20.99■□□□□ 0.95
NXF1-216ENST00000533499 APOBEC3FQ8IUX4 373 aaKnown RBP20.99■□□□□ 0.95
NXF1-216ENST00000533499 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
NXF1-216ENST00000533499 TGFBRAP1Q8WUH2 860 aa20.99■□□□□ 0.95
NXF1-216ENST00000533499 GLIS2Q9BZE0 524 aaPredicted RBP20.99■□□□□ 0.95
NXF1-216ENST00000533499 CRNKL1Q9BZJ0 848 aaKnown RBP20.99■□□□□ 0.95
NXF1-216ENST00000533499 ECM29Q5VYK3 1845 aa20.99■□□□□ 0.95
NXF1-216ENST00000533499 A0A0D9SFI3 127 aa20.98■□□□□ 0.95
NXF1-216ENST00000533499 ADM5C9JUS6 153 aa20.98■□□□□ 0.95
NXF1-216ENST00000533499 TNNI2P48788 182 aa20.98■□□□□ 0.95
NXF1-216ENST00000533499 RHBDL3P58872 404 aa20.98■□□□□ 0.95
NXF1-216ENST00000533499 NFIAQ12857 509 aa20.98■□□□□ 0.95
NXF1-216ENST00000533499 MAPKAPK5Q8IW41 473 aa20.98■□□□□ 0.95
NXF1-216ENST00000533499 RFX7Q2KHR2 1363 aa20.97■□□□□ 0.95
NXF1-216ENST00000533499 GPAA1O43292 621 aa20.97■□□□□ 0.95
NXF1-216ENST00000533499 TNFAIP1Q13829 316 aa20.97■□□□□ 0.95
NXF1-216ENST00000533499 CERS3Q8IU89 383 aa20.97■□□□□ 0.95
NXF1-216ENST00000533499 ZSCAN29Q8IWY8 852 aaPredicted RBP20.97■□□□□ 0.95
NXF1-216ENST00000533499 RIOK1Q9BRS2 568 aaKnown RBP20.97■□□□□ 0.95
NXF1-216ENST00000533499 HELLSQ9NRZ9 838 aa20.97■□□□□ 0.95
NXF1-216ENST00000533499 SLC4A4Q9Y6R1 1079 aa20.97■□□□□ 0.95
NXF1-216ENST00000533499 PRKAB2O43741 272 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 CDC45O75419 566 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 APPP05067 770 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 CHMLP26374 656 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 RASA3Q14644 834 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 MCMDC2Q4G0Z9 681 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 CASC1Q6TDU7 716 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 DLK2Q6UY11 383 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 CDC37L1Q7L3B6 337 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 RUFY2Q8WXA3 655 aa20.96■□□□□ 0.95
NXF1-216ENST00000533499 WDHD1O75717 1129 aaPredicted RBP20.95■□□□□ 0.94
NXF1-216ENST00000533499 TOMM70O94826 608 aa20.95■□□□□ 0.94
NXF1-216ENST00000533499 SLC4A8Q2Y0W8 1093 aa20.95■□□□□ 0.94
NXF1-216ENST00000533499 SMC1BQ8NDV3 1235 aa20.95■□□□□ 0.94
NXF1-216ENST00000533499 SDR42E1Q8WUS8 393 aa20.95■□□□□ 0.94
NXF1-216ENST00000533499 DEFB129Q9H1M3 183 aa20.95■□□□□ 0.94
NXF1-216ENST00000533499 PGAP2Q9UHJ9 254 aa20.95■□□□□ 0.94
NXF1-216ENST00000533499 SAP30BPQ9UHR5 308 aaKnown RBP20.95■□□□□ 0.94
NXF1-216ENST00000533499 PITPNM2Q9BZ72 1349 aa20.95■□□□□ 0.94
NXF1-216ENST00000533499 TICAM2Q86XR7 235 aa20.94■□□□□ 0.94
NXF1-216ENST00000533499 DDRGK1Q96HY6 314 aa20.94■□□□□ 0.94
NXF1-216ENST00000533499 STRBPQ96SI9 672 aaKnown RBP20.94■□□□□ 0.94
NXF1-216ENST00000533499 TMEM39BQ9GZU3 492 aa20.94■□□□□ 0.94
NXF1-216ENST00000533499 ZNF408Q9H9D4 720 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms