RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SLU7O95391 586 aaKnown RBP19.89■□□□□ 0.77
PHRF1-205ENST00000533464 PLA2R1Q13018 1463 aa19.89■□□□□ 0.77
PHRF1-205ENST00000533464 KDM5DQ9BY66 1539 aa19.89■□□□□ 0.77
PHRF1-205ENST00000533464 SYNMO15061 1565 aa19.89■□□□□ 0.77
PHRF1-205ENST00000533464 EYA3Q99504 573 aa19.89■□□□□ 0.77
PHRF1-205ENST00000533464 BICDL2A1A5D9 508 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 BICD1Q96G01 975 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 AATFQ9NY61 560 aaKnown RBP eCLIP19.88■□□□□ 0.774e-7■■■■■ 34.9
PHRF1-205ENST00000533464 WWC3Q9ULE0 1092 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 TTC37Q6PGP7 1564 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 CTR9Q6PD62 1173 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 MROH5Q6ZUA9 1318 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 CCDC172P0C7W6 258 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 CCDC42Q96M95 316 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 IGSF1Q8N6C5 1336 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 TUBB4AP04350 444 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 ARID5AQ03989 594 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 IFI16Q16666 785 aaKnown RBP19.88■□□□□ 0.77
PHRF1-205ENST00000533464 SEC62Q99442 399 aaKnown RBP19.88■□□□□ 0.77
PHRF1-205ENST00000533464 LZTFL1Q9NQ48 299 aa19.88■□□□□ 0.77
PHRF1-205ENST00000533464 KARSQ15046 597 aaKnown RBP19.87■□□□□ 0.77
PHRF1-205ENST00000533464 PROSER3Q2NL68 480 aa19.87■□□□□ 0.77
PHRF1-205ENST00000533464 PIK3AP1Q6ZUJ8 805 aa19.87■□□□□ 0.77
PHRF1-205ENST00000533464 RBM17Q96I25 401 aaKnown RBP19.87■□□□□ 0.77
PHRF1-205ENST00000533464 ARFGAP3Q9NP61 516 aa19.87■□□□□ 0.77
PHRF1-205ENST00000533464 NEBLO76041 1014 aa19.87■□□□□ 0.77
PHRF1-205ENST00000533464 KRT40Q6A162 431 aa19.87■□□□□ 0.77
PHRF1-205ENST00000533464 PUF60Q9UHX1 559 aaKnown RBP19.87■□□□□ 0.77
PHRF1-205ENST00000533464 CKAP4Q07065 602 aaKnown RBP19.87■□□□□ 0.77
PHRF1-205ENST00000533464 TMEM63CQ9P1W3 806 aa19.87■□□□□ 0.77
PHRF1-205ENST00000533464 FAM98CQ17RN3 349 aaKnown RBP19.87■□□□□ 0.77
PHRF1-205ENST00000533464 KIF5AQ12840 1032 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 KRT13P13646 458 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 TBC1D5Q92609 795 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 TAOK3Q9H2K8 898 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 ROBO2Q9HCK4 1378 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 KRT83P78385 493 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 SYT10Q6XYQ8 523 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 MLH3Q9UHC1 1453 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 CTAGE9A4FU28 777 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 CTNNA2P26232 953 aa19.86■□□□□ 0.77
PHRF1-205ENST00000533464 GTF2F1P35269 517 aaKnown RBP eCLIP19.86■□□□□ 0.77
PHRF1-205ENST00000533464 SRRTQ9BXP5 876 aaKnown RBP19.86■□□□□ 0.77
PHRF1-205ENST00000533464 LUC7L2Q9Y383 392 aaKnown RBP19.86■□□□□ 0.77
PHRF1-205ENST00000533464 EFCAB6Q5THR3 1501 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 POLR2DO15514 142 aaKnown RBP19.85■□□□□ 0.77
PHRF1-205ENST00000533464 TACC1O75410 805 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 GTF3C6Q969F1 213 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 CBX8Q9HC52 389 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 SSH2Q76I76 1423 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 KRT86O43790 486 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 PRR36Q9H6K5 1346 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 ATP7BP35670 1465 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 ZNF202O95125 648 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 PLEKHG1Q9ULL1 1385 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 ZNF853P0CG23 659 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 PKP1Q13835 747 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 WDR66Q8TBY9 1149 aa19.85■□□□□ 0.77
PHRF1-205ENST00000533464 CTSWP56202 376 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 ARHGEF25Q86VW2 580 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 DNAI2Q9GZS0 605 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 GPCPD1Q9NPB8 672 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 GUCA1BQ9UMX6 200 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 DHX37Q8IY37 1157 aaKnown RBP19.84■□□□□ 0.77
PHRF1-205ENST00000533464 CUTAO60888 179 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 WDHD1O75717 1129 aaPredicted RBP19.84■□□□□ 0.77
PHRF1-205ENST00000533464 MAATS1Q7Z4T9 603 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 GTPBP4Q9BZE4 634 aaKnown RBP19.84■□□□□ 0.77
PHRF1-205ENST00000533464 GGA1Q9UJY5 639 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 EIF6P56537 245 aaKnown RBP19.84■□□□□ 0.77
PHRF1-205ENST00000533464 LRRC24Q50LG9 513 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 STAP2Q9UGK3 403 aa19.84■□□□□ 0.77
PHRF1-205ENST00000533464 MRPL12P52815 198 aaKnown RBP19.83■□□□□ 0.77
PHRF1-205ENST00000533464 MCM6Q14566 821 aa19.83■□□□□ 0.77
PHRF1-205ENST00000533464 KRT222Q8N1A0 295 aa19.83■□□□□ 0.77
PHRF1-205ENST00000533464 CCT6AP40227 531 aaKnown RBP19.83■□□□□ 0.77
PHRF1-205ENST00000533464 RBM26Q5T8P6 1007 aaKnown RBP19.83■□□□□ 0.77
PHRF1-205ENST00000533464 UNC5CLQ8IV45 518 aa19.83■□□□□ 0.77
PHRF1-205ENST00000533464 ZSWIM6Q9HCJ5 1215 aa19.83■□□□□ 0.76
PHRF1-205ENST00000533464 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.76
PHRF1-205ENST00000533464 KCNJ14Q9UNX9 436 aa19.83■□□□□ 0.76
PHRF1-205ENST00000533464 PLCD1P51178 756 aa19.83■□□□□ 0.76
PHRF1-205ENST00000533464 MAP2K1Q02750 393 aaPredicted RBP19.83■□□□□ 0.76
PHRF1-205ENST00000533464 HAUS7Q99871 368 aa19.83■□□□□ 0.76
PHRF1-205ENST00000533464 EZRP15311 586 aaKnown RBP19.82■□□□□ 0.76
PHRF1-205ENST00000533464 LMAN1P49257 510 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 HS2ST1Q7LGA3 356 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 USP37Q86T82 979 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 BAG1Q99933 345 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-205ENST00000533464 AKNAD1Q5T1N1 836 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 HOOK3Q86VS8 718 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 NEK11Q8NG66 645 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 FAM13AO94988 1023 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 ZNF569Q5MCW4 686 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-205ENST00000533464 CNGA4Q8IV77 575 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 COPRSQ9NQ92 184 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 USP6P35125 1406 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 KIAA0753Q2KHM9 967 aa19.82■□□□□ 0.76
PHRF1-205ENST00000533464 TTC38Q5R3I4 469 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms