RNA–Protein interactions for RNA: ENST00000533258.5

MMP8-206, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-206ENST00000533258 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
MMP8-206ENST00000533258 PPATQ06203 517 aa10.95□□□□□ -0.66
MMP8-206ENST00000533258 CD209Q9NNX6 404 aa10.95□□□□□ -0.66
MMP8-206ENST00000533258 KCNH4Q9UQ05 1017 aa10.95□□□□□ -0.66
MMP8-206ENST00000533258 LEMD3Q9Y2U8 911 aa10.95□□□□□ -0.66
MMP8-206ENST00000533258 SPEF2Q9C093 1822 aa10.95□□□□□ -0.66
MMP8-206ENST00000533258 LTBP2Q14767 1821 aa10.94□□□□□ -0.66
MMP8-206ENST00000533258 TNPO2O14787 897 aaKnown RBP10.94□□□□□ -0.66
MMP8-206ENST00000533258 HSP90B1P14625 803 aaKnown RBP10.94□□□□□ -0.66
MMP8-206ENST00000533258 FKBP1AP62942 108 aaKnown RBP10.94□□□□□ -0.66
MMP8-206ENST00000533258 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
MMP8-206ENST00000533258 C9orf50Q5SZB4 431 aa10.94□□□□□ -0.66
MMP8-206ENST00000533258 GPAT2Q6NUI2 795 aa10.94□□□□□ -0.66
MMP8-206ENST00000533258 WRNIP1Q96S55 665 aa10.94□□□□□ -0.66
MMP8-206ENST00000533258 PARK7Q99497 189 aaKnown RBP10.94□□□□□ -0.66
MMP8-206ENST00000533258 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
MMP8-206ENST00000533258 TDRD3Q9H7E2 651 aaKnown RBP10.94□□□□□ -0.66
MMP8-206ENST00000533258 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
MMP8-206ENST00000533258 REV3LO60673 3130 aa10.93□□□□□ -0.66
MMP8-206ENST00000533258 TCP10L2B9ZVM9 353 aa10.93□□□□□ -0.66
MMP8-206ENST00000533258 HSPA5P11021 654 aaKnown RBP10.93□□□□□ -0.66
MMP8-206ENST00000533258 MRPS5P82675 430 aaKnown RBP10.93□□□□□ -0.66
MMP8-206ENST00000533258 TRIM32Q13049 653 aa10.93□□□□□ -0.66
MMP8-206ENST00000533258 CDC5LQ99459 802 aaKnown RBP10.93□□□□□ -0.66
MMP8-206ENST00000533258 P2RX7Q99572 595 aaKnown RBP10.93□□□□□ -0.66
MMP8-206ENST00000533258 HMX1Q9NP08 348 aaPredicted RBP10.93□□□□□ -0.66
MMP8-206ENST00000533258 NUDCQ9Y266 331 aa10.93□□□□□ -0.66
MMP8-206ENST00000533258 TCF20Q9UGU0 1960 aaKnown RBP10.93□□□□□ -0.66
MMP8-206ENST00000533258 HMGCRP04035 888 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 RBM5P52756 815 aaKnown RBP eCLIP10.92□□□□□ -0.66
MMP8-206ENST00000533258 NECAB3Q96P71 396 aaPredicted RBP10.92□□□□□ -0.66
MMP8-206ENST00000533258 EPHX3Q9H6B9 360 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 CHPF2Q9P2E5 772 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 THEGQ9P2T0 379 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 TSPYL4Q9UJ04 414 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 FARP1Q9Y4F1 1045 aaPredicted RBP10.92□□□□□ -0.66
MMP8-206ENST00000533258 MAST2Q6P0Q8 1798 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 MYO9BQ13459 2157 aa10.92□□□□□ -0.66
MMP8-206ENST00000533258 PCCAP05165 728 aaPredicted RBP10.91□□□□□ -0.66
MMP8-206ENST00000533258 MRE11P49959 708 aa10.91□□□□□ -0.66
MMP8-206ENST00000533258 JARID2Q92833 1246 aaPredicted RBP10.91□□□□□ -0.66
MMP8-206ENST00000533258 IL1R1P14778 569 aa10.9□□□□□ -0.66
MMP8-206ENST00000533258 INPP5BP32019 993 aa10.9□□□□□ -0.66
MMP8-206ENST00000533258 EIF4G2P78344 907 aaKnown RBP eCLIP10.9□□□□□ -0.66
MMP8-206ENST00000533258 MAP3K21Q5TCX8 1036 aa10.9□□□□□ -0.66
MMP8-206ENST00000533258 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
MMP8-206ENST00000533258 DZIP1LQ8IYY4 767 aaKnown RBP10.9□□□□□ -0.66
MMP8-206ENST00000533258 TTLL11Q8NHH1 800 aa10.9□□□□□ -0.66
MMP8-206ENST00000533258 C11orf16Q9NQ32 467 aa10.9□□□□□ -0.66
MMP8-206ENST00000533258 SERPINA10Q9UK55 444 aa10.9□□□□□ -0.66
MMP8-206ENST00000533258 TNNI2P48788 182 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 CTSWP56202 376 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 TMEM31Q5JXX7 168 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 C15orf52Q6ZUT6 534 aaKnown RBP10.89□□□□□ -0.67
MMP8-206ENST00000533258 COA7Q96BR5 231 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 CFAP53Q96M91 514 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 GREM2Q9H772 168 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 GJD2Q9UKL4 321 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 CHD9Q3L8U1 2897 aa10.89□□□□□ -0.67
MMP8-206ENST00000533258 SNAP23O00161 211 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 BMP1P13497 986 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 KRT24Q2M2I5 525 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 LHX8Q68G74 356 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 CCDC191Q8NCU4 936 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 PLEKHF1Q96S99 279 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 BABAM1Q9NWV8 329 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 MYH3P11055 1940 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 AK9Q5TCS8 1911 aa10.88□□□□□ -0.67
MMP8-206ENST00000533258 PLXNB2O15031 1838 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 CXCL11O14625 94 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 GPR37L1O60883 481 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 NFE2L2Q16236 605 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 RIC3Q7Z5B4 369 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 PPM1EQ8WY54 764 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 TRIB2Q92519 343 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 ANKRD2Q9GZV1 360 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 RTN4Q9NQC3 1192 aaKnown RBP10.87□□□□□ -0.67
MMP8-206ENST00000533258 ZNF112Q9UJU3 913 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 JAG2Q9Y219 1238 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 SLC45A1Q9Y2W3 748 aa10.87□□□□□ -0.67
MMP8-206ENST00000533258 CACNB3P54284 484 aa10.86□□□□□ -0.67
MMP8-206ENST00000533258 PDE3AQ14432 1141 aa10.86□□□□□ -0.67
MMP8-206ENST00000533258 ZNF576Q9H609 170 aa10.86□□□□□ -0.67
MMP8-206ENST00000533258 DBF4Q9UBU7 674 aaPredicted RBP10.86□□□□□ -0.67
MMP8-206ENST00000533258 TTF2Q9UNY4 1162 aaKnown RBP10.86□□□□□ -0.67
MMP8-206ENST00000533258 CHD7Q9P2D1 2997 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 A0A0G2JLL6 359 aaPredicted RBP10.85□□□□□ -0.67
MMP8-206ENST00000533258 NUBP1P53384 320 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 DCAF15Q66K64 600 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 MIGA2Q7L4E1 593 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 PRRT2Q7Z6L0 340 aaPredicted RBP10.85□□□□□ -0.67
MMP8-206ENST00000533258 FAM83AQ86UY5 434 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 ANKRD13CQ8N6S4 541 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 IL27Q8NEV9 243 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 HOOK2Q96ED9 719 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 ZNF341Q9BYN7 854 aa10.85□□□□□ -0.67
MMP8-206ENST00000533258 PTPRFP10586 1907 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms