RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZKSCAN4Q969J2 545 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC4-213ENST00000533149 FAM205AQ6ZU69 1335 aa14.27□□□□□ -0.13
TRAPPC4-213ENST00000533149 SNAP23O00161 211 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 ZNF853P0CG23 659 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 GNAI1P63096 354 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 CWF19L2Q2TBE0 894 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 NECAB2Q7Z6G3 386 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 PXYLP1Q8TE99 480 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 DEFB118Q96PH6 123 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 IFT57Q9NWB7 429 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 ADGRA2Q96PE1 1338 aa14.26□□□□□ -0.13
TRAPPC4-213ENST00000533149 ADCY3O60266 1144 aa14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 CRKP46108 304 aa14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 DCAF15Q66K64 600 aa14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 TDHQ8IZJ6 230 aa14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 TSR2Q969E8 191 aaKnown RBP14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 PAWRQ96IZ0 340 aaKnown RBP14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 PARK7Q99497 189 aaKnown RBP14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 ARAP2Q8WZ64 1704 aa14.25□□□□□ -0.13
TRAPPC4-213ENST00000533149 BCAMP50895 628 aa14.24□□□□□ -0.13
TRAPPC4-213ENST00000533149 CRISPLD2Q9H0B8 497 aa14.24□□□□□ -0.13
TRAPPC4-213ENST00000533149 PAK6Q9NQU5 681 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-213ENST00000533149 RCAN3Q9UKA8 241 aa14.24□□□□□ -0.13
TRAPPC4-213ENST00000533149 INHAP05111 366 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 BCRP11274 1271 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 EXOSC9Q06265 439 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 IFIT5Q13325 482 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 GCKRQ14397 625 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 FAM83AQ86UY5 434 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 C7orf61Q8IZ16 206 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 ANKLE1Q8NAG6 615 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 TDRD7Q8NHU6 1098 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 FANCIQ9NVI1 1328 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 TMOD2Q9NZR1 351 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 GABRQQ9UN88 632 aa14.23□□□□□ -0.13
TRAPPC4-213ENST00000533149 FLT3LGP49771 235 aa14.22□□□□□ -0.13
TRAPPC4-213ENST00000533149 HDLBPQ00341 1268 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-213ENST00000533149 IRF5Q13568 498 aa14.22□□□□□ -0.13
TRAPPC4-213ENST00000533149 ZNF341Q9BYN7 854 aa14.22□□□□□ -0.13
TRAPPC4-213ENST00000533149 ZMYND8Q9ULU4 1186 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-213ENST00000533149 KCNH4Q9UQ05 1017 aa14.22□□□□□ -0.13
TRAPPC4-213ENST00000533149 LAMA3Q16787 3333 aa14.22□□□□□ -0.13
TRAPPC4-213ENST00000533149 RPTORQ8N122 1335 aa14.21□□□□□ -0.13
TRAPPC4-213ENST00000533149 ELNP15502 786 aa14.21□□□□□ -0.13
TRAPPC4-213ENST00000533149 FKBP1CQ5VVH2 108 aa14.21□□□□□ -0.13
TRAPPC4-213ENST00000533149 C8orf58Q8NAV2 365 aa14.21□□□□□ -0.13
TRAPPC4-213ENST00000533149 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
TRAPPC4-213ENST00000533149 PRDM6Q9NQX0 595 aa14.21□□□□□ -0.13
TRAPPC4-213ENST00000533149 HIBADHP31937 336 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-213ENST00000533149 MAGEA10P43363 369 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-213ENST00000533149 CASP7P55210 303 aa14.2□□□□□ -0.14
TRAPPC4-213ENST00000533149 TEKT1Q969V4 418 aa14.2□□□□□ -0.14
TRAPPC4-213ENST00000533149 UBE2OQ9C0C9 1292 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-213ENST00000533149 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-213ENST00000533149 TNPO2O14787 897 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 PLIN1O60240 522 aa14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 CYP2C8P10632 490 aa14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 CACNB3P54284 484 aa14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 MOGSQ13724 837 aa14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 FAM109BQ6ICB4 259 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 DIS3LQ8TF46 1054 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 NBPF3Q9H094 633 aa14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 RPAP1Q9BWH6 1393 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-213ENST00000533149 CXCL11O14625 94 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 SYN1P17600 705 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 INPP5BP32019 993 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 LDHAL6AQ6ZMR3 332 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 MIGA2Q7L4E1 593 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 FASTKD5Q7L8L6 764 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 TBC1D22AQ8WUA7 517 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 MRIQ9BWK5 157 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 CHMP3Q9Y3E7 222 aa14.18□□□□□ -0.14
TRAPPC4-213ENST00000533149 CT47B1P0C2W7 299 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 GYG1P46976 350 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 UBE4AQ14139 1066 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 TAF7LQ5H9L4 462 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 GPAT2Q6NUI2 795 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 COA7Q96BR5 231 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 FAM84BQ96KN1 310 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 ZDHHC15Q96MV8 337 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 CNNM1Q9NRU3 951 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 ZNF112Q9UJU3 913 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 MGAMO43451 1857 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 ALPK3Q96L96 1907 aa14.17□□□□□ -0.14
TRAPPC4-213ENST00000533149 POTEB2H3BUK9 544 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 CCDC57Q2TAC2 916 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 NOL9Q5SY16 702 aaKnown RBP14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 TSPYL6Q8N831 410 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 LINS1Q8NG48 757 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 C11orf49Q9H6J7 331 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 TAOK2Q9UL54 1235 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 SLC45A1Q9Y2W3 748 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 MAST3O60307 1309 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 A0A1B0GUL6 1792 aa14.16□□□□□ -0.14
TRAPPC4-213ENST00000533149 VAMP4O75379 141 aa14.15□□□□□ -0.14
TRAPPC4-213ENST00000533149 RARSP54136 660 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-213ENST00000533149 FOXO4P98177 505 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms