RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 MBD4O95243 580 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.36
SSH3-210ENST00000532881 GOLGA8FQ08AF8 430 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 GOLGA8DPQ0D2H9 430 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 RASGRF1Q13972 1273 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 LRRFIP1Q32MZ4 808 aaKnown RBP17.3■□□□□ 0.36
SSH3-210ENST00000532881 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
SSH3-210ENST00000532881 POLR3EQ9NVU0 708 aa17.3■□□□□ 0.36
SSH3-210ENST00000532881 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 FOXN1O15353 648 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 DHX16O60231 1041 aaKnown RBP17.29■□□□□ 0.36
SSH3-210ENST00000532881 SLC3A2P08195 630 aaKnown RBP17.29■□□□□ 0.36
SSH3-210ENST00000532881 BCAMP50895 628 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 CCZ1BP86790 482 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 CCZ1P86791 482 aaPredicted RBP17.29■□□□□ 0.36
SSH3-210ENST00000532881 PNOCQ13519 176 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
SSH3-210ENST00000532881 SARM1Q6SZW1 724 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 SMIM5Q71RC9 77 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 MRFAP1L1Q96HT8 127 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 STRBPQ96SI9 672 aaKnown RBP17.29■□□□□ 0.36
SSH3-210ENST00000532881 SUSD4Q5VX71 490 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 SHC4Q6S5L8 630 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 KLHL34Q8N239 644 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 IGDCC4Q8TDY8 1250 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 KCNJ14Q9UNX9 436 aa17.29■□□□□ 0.36
SSH3-210ENST00000532881 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
SSH3-210ENST00000532881 GRIN1Q05586 938 aa17.28■□□□□ 0.36
SSH3-210ENST00000532881 TMEM67Q5HYA8 995 aa17.28■□□□□ 0.36
SSH3-210ENST00000532881 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
SSH3-210ENST00000532881 KCNG4Q8TDN1 519 aa17.28■□□□□ 0.36
SSH3-210ENST00000532881 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
SSH3-210ENST00000532881 ZMYM6O95789 1325 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 SLIT2O94813 1529 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 ZRSR1Q15695 479 aaKnown RBP17.27■□□□□ 0.36
SSH3-210ENST00000532881 ATL3Q6DD88 541 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 TMC6Q7Z403 805 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.36
SSH3-210ENST00000532881 PDE8AO60658 829 aa17.27■□□□□ 0.35
SSH3-210ENST00000532881 NCBP1Q09161 790 aaKnown RBP17.27■□□□□ 0.35
SSH3-210ENST00000532881 NTRK3Q16288 839 aa17.27■□□□□ 0.35
SSH3-210ENST00000532881 LCORLQ8N3X6 602 aa17.27■□□□□ 0.35
SSH3-210ENST00000532881 SPATA5Q8NB90 893 aa17.27■□□□□ 0.35
SSH3-210ENST00000532881 CCDC94Q9BW85 323 aaPredicted RBP17.27■□□□□ 0.35
SSH3-210ENST00000532881 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.26■□□□□ 0.35
SSH3-210ENST00000532881 hCG_1642624A0A1W2PR95 340 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 IFIT3O14879 490 aaKnown RBP17.26■□□□□ 0.35
SSH3-210ENST00000532881 NPHP1O15259 732 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 ZBTB43O43298 467 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 YEATS4O95619 227 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 CDC25BP30305 580 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 CEP135Q66GS9 1140 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 PDCL2Q8N4E4 241 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 DPF2Q92785 391 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 CDHR2Q9BYE9 1310 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 KCNQ4P56696 695 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 NCAPHQ15003 741 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 TEX13AQ9BXU3 409 aaPredicted RBP17.26■□□□□ 0.35
SSH3-210ENST00000532881 NAPBQ9H115 298 aa17.26■□□□□ 0.35
SSH3-210ENST00000532881 SPEF2Q9C093 1822 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 BTBD18B2RXH4 712 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
SSH3-210ENST00000532881 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 ARMCX5Q6P1M9 558 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 FOXP4Q8IVH2 680 aaPredicted RBP17.25■□□□□ 0.35
SSH3-210ENST00000532881 CTIFO43310 598 aaKnown RBP17.25■□□□□ 0.35
SSH3-210ENST00000532881 CAVIN2O95810 425 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 SYKP43405 635 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 UBE3CQ15386 1083 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 LONRF3Q496Y0 759 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
SSH3-210ENST00000532881 IGSF3O75054 1194 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 PTPAQ15257 358 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 PUM3Q15397 648 aaKnown RBP17.24■□□□□ 0.35
SSH3-210ENST00000532881 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 SDR42E1Q8WUS8 393 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 MYH7P12883 1935 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 GSG1L2A8MUP6 293 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 FGFR2P21802 821 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 CMA1P23946 247 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
SSH3-210ENST00000532881 EVX2Q03828 476 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 NR5A1Q13285 461 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 GRAMD1CQ8IYS0 662 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 LPIN2Q92539 896 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 MPHOSPH8Q99549 860 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 MAP3K14Q99558 947 aa17.24■□□□□ 0.35
SSH3-210ENST00000532881 NAT10Q9H0A0 1025 aaKnown RBP17.24■□□□□ 0.35
SSH3-210ENST00000532881 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms