RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 AKR1B10O60218 316 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 PRDM1O75626 825 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 DTHD1Q6ZMT9 781 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 PHKBQ93100 1093 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 ALS2CR12Q96Q35 445 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 MYL10Q9BUA6 226 aa17.42■□□□□ 0.38
PCDHA3-202ENST00000532566 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 EHBP1Q8NDI1 1231 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 ERMNQ8TAM6 284 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 PFKFB2O60825 505 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 CUTAO60888 179 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 TRAPPC3LQ5T215 181 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 CNBD1Q8NA66 436 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 GPT2Q8TD30 523 aa17.41■□□□□ 0.38
PCDHA3-202ENST00000532566 CYLC1P35663 651 aaPredicted RBP17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 CTDSPL2Q05D32 466 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 TRAF1Q13077 416 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 TSPYL1Q9H0U9 437 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 ZSWIM4Q9H7M6 989 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 GAS2L3Q86XJ1 694 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 V9GY48 417 aaPredicted RBP17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 ZNF202O95125 648 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 SLU7O95391 586 aaKnown RBP17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 CCDC175P0C221 793 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 AKNAD1Q5T1N1 836 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 CHAMP1Q96JM3 812 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 DNA2P51530 1060 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
PCDHA3-202ENST00000532566 BMS1Q14692 1282 aaKnown RBP17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 STXBP4Q6ZWJ1 553 aa17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 PATL2C9JE40 543 aaKnown RBP17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 ZNF174Q15697 407 aa17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 MAP3K15Q6ZN16 1313 aa17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 ZNF75DP51815 510 aa17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 KRT79Q5XKE5 535 aa17.39■□□□□ 0.37
PCDHA3-202ENST00000532566 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 SRRTQ9BXP5 876 aaKnown RBP17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 PDE6AP16499 860 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 CETN1Q12798 172 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 TTC6Q86TZ1 520 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 WDR17Q8IZU2 1322 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 TBCAO75347 108 aaKnown RBP17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 FGAP02671 866 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 LIG1P18858 919 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 PRM3Q9NNZ6 103 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 ERICH4A6NGS2 130 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 CIAO1O76071 339 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 TNNI2P48788 182 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 GIGYF2Q6Y7W6 1299 aaKnown RBP17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 GTPBP4Q9BZE4 634 aaKnown RBP17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 PRDM10Q9NQV6 1147 aa17.38■□□□□ 0.37
PCDHA3-202ENST00000532566 WDR66Q8TBY9 1149 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 CAMSAP1Q5T5Y3 1602 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 ADCY9O60503 1353 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 PPP1R9BQ96SB3 815 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 PUS3Q9BZE2 481 aaKnown RBP17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 JADE2Q9NQC1 790 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 CYP21A2P08686 494 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 ZMYM1Q5SVZ6 1142 aa17.37■□□□□ 0.37
PCDHA3-202ENST00000532566 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 POLR2DO15514 142 aaKnown RBP17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 SASH1O94885 1247 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 ASAP1Q9ULH1 1129 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 PARP1P09874 1014 aaKnown RBP17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 PTPN12Q05209 780 aaKnown RBP17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 ADALQ6DHV7 355 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 SPDYE4A6NLX3 237 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 POLR3GO15318 223 aaPredicted RBP17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 UFL1O94874 794 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 POTEJP0CG39 1038 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
PCDHA3-202ENST00000532566 BICDL2A1A5D9 508 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 KIAA0754O94854 1291 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 SPAG5Q96R06 1193 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 PDE8BO95263 885 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 GREM2Q9H772 168 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 PTPRMP28827 1452 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 RIMBP2O15034 1052 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 NLRP12P59046 1061 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 NAA15Q9BXJ9 866 aaKnown RBP17.35■□□□□ 0.37
PCDHA3-202ENST00000532566 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-202ENST00000532566 FANCCQ00597 558 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms