RNA–Protein interactions for RNA: ENST00000532517.5

PHLDB1-220, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 1 (best)

Gene PHLDB1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-220ENST00000532517 NOX5Q96PH1 765 aa16.64■□□□□ 0.26
PHLDB1-220ENST00000532517 ZNF131P52739 623 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 KSR2Q6VAB6 950 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 CCDC117Q8IWD4 279 aaPredicted RBP16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 NUP58Q9BVL2 599 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 RAPGEF3O95398 923 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 PPFIA1Q13136 1202 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 MAP7Q14244 749 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 C8orf34Q49A92 452 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 FAM114A2Q9NRY5 505 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 CHPF2Q9P2E5 772 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 GOLGA6BA6NDN3 693 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 PPP1R21Q6ZMI0 780 aa16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
PHLDB1-220ENST00000532517 FOXO3O43524 673 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 RFC4P35249 363 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 CCT6AP40227 531 aaKnown RBP16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 TIAM1Q13009 1591 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 XAGE3Q8WTP9 111 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 RALGAPBQ86X10 1494 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 NCOA1Q15788 1441 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 RASA3Q14644 834 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 ITIH3Q06033 890 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 LIN9Q5TKA1 542 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 RAB3IPQ96QF0 476 aaPredicted RBP16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 EPRSP07814 1512 aaKnown RBP16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 GIPC1O14908 333 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 ANXA1P04083 346 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 PAK2Q13177 524 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 MTMR3Q13615 1198 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 LGSNQ5TDP6 509 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 CNNM4Q6P4Q7 775 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 CETN3O15182 167 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 CA8P35219 290 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 HHATQ5VTY9 493 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 ZBTB9Q96C00 473 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 TBC1D31Q96DN5 1066 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 IMPACTQ9P2X3 320 aa16.63■□□□□ 0.25
PHLDB1-220ENST00000532517 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 ZNF804AQ7Z570 1209 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 FNBP1Q96RU3 617 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 CARD6Q9BX69 1037 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 SCAF11Q99590 1463 aaKnown RBP16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 A0A1B0GVL5 298 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 OGFOD1Q8N543 542 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 BCAP29Q9UHQ4 241 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 CTNND2Q9UQB3 1225 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 KRT5P13647 590 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 TRPC3Q13507 836 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 TMTC1Q8IUR5 882 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 MRPL50Q8N5N7 158 aaKnown RBP16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 TSKSQ9UJT2 592 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 TTC36A6NLP5 189 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 SH3BGRP55822 239 aaPredicted RBP16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 SLC8A3P57103 927 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 SLC9C1Q4G0N8 1177 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 NLRP3Q96P20 1036 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
PHLDB1-220ENST00000532517 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 STK10O94804 968 aaKnown RBP16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 BIRC3Q13489 604 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 ASIC2Q16515 512 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 SH2D4BQ5SQS7 431 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 PLCB1Q9NQ66 1216 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 PICALMQ13492 652 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 AKNAD1Q5T1N1 836 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 PSMD6Q15008 389 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 IQSEC3Q9UPP2 1182 aaPredicted RBP16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 I3L4J1 428 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 MCM9Q9NXL9 1143 aa16.61■□□□□ 0.25
PHLDB1-220ENST00000532517 HMGB1P1B2RPK0 211 aaPredicted RBP16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 ARHGAP6O43182 974 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 PDE4DQ08499 809 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 VPS16Q9H269 839 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 RASSF2P50749 326 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 PLS1Q14651 629 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 MLKLQ8NB16 471 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 ZKSCAN3Q9BRR0 538 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 SATB1Q01826 763 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 TAF12Q16514 161 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 RNF10Q8N5U6 811 aaKnown RBP16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 AMOTL2Q9Y2J4 779 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 RABGAP1Q9Y3P9 1069 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 PLIN2Q99541 437 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 HAUS7Q99871 368 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 VCX3AQ9NNX9 186 aa16.6■□□□□ 0.25
PHLDB1-220ENST00000532517 FANCCQ00597 558 aa16.59■□□□□ 0.25
PHLDB1-220ENST00000532517 ASIC3Q9UHC3 531 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms