RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 DENND2AQ9ULE3 1009 aa9.76□□□□□ -0.85
TRIM49-202ENST00000532501 SCAF8Q9UPN6 1271 aaKnown RBP9.76□□□□□ -0.85
TRIM49-202ENST00000532501 PDS5AQ29RF7 1337 aaKnown RBP9.75□□□□□ -0.85
TRIM49-202ENST00000532501 SALL1Q9NSC2 1324 aa9.75□□□□□ -0.85
TRIM49-202ENST00000532501 SEMA3EO15041 775 aa9.75□□□□□ -0.85
TRIM49-202ENST00000532501 C1QTNF8P60827 252 aa9.75□□□□□ -0.85
TRIM49-202ENST00000532501 TBC1D10BQ4KMP7 808 aaPredicted RBP9.75□□□□□ -0.85
TRIM49-202ENST00000532501 DLK2Q6UY11 383 aa9.75□□□□□ -0.85
TRIM49-202ENST00000532501 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRIM49-202ENST00000532501 ABCF2Q9UG63 623 aa9.75□□□□□ -0.85
TRIM49-202ENST00000532501 TTC41PQ6P2S7 1318 aa9.75□□□□□ -0.85
TRIM49-202ENST00000532501 RGS3P49796 1198 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 ZNF280AP59817 542 aaPredicted RBP9.74□□□□□ -0.85
TRIM49-202ENST00000532501 MECOMQ03112 1051 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 TNIP1Q15025 636 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 WDR66Q8TBY9 1149 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 ZBED3Q96IU2 234 aaPredicted RBP9.74□□□□□ -0.85
TRIM49-202ENST00000532501 OSBPL3Q9H4L5 887 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 TAF1DQ9H5J8 278 aaPredicted RBP9.74□□□□□ -0.85
TRIM49-202ENST00000532501 RRAGCQ9HB90 399 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 GNL3LQ9NVN8 582 aaKnown RBP9.74□□□□□ -0.85
TRIM49-202ENST00000532501 PAG1Q9NWQ8 432 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 CNOT7Q9UIV1 285 aaKnown RBP9.74□□□□□ -0.85
TRIM49-202ENST00000532501 TTF2Q9UNY4 1162 aaKnown RBP9.74□□□□□ -0.85
TRIM49-202ENST00000532501 WDR90Q96KV7 1748 aa9.74□□□□□ -0.85
TRIM49-202ENST00000532501 KIF3CO14782 793 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 GLRX3O76003 335 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 FKBP1AP62942 108 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 NBPF9Q3BBW0 867 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 RBM26Q5T8P6 1007 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 AGBL3Q8NEM8 1001 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 DPF2Q92785 391 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 NSUN4Q96CB9 384 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 IL25Q9H293 177 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 DAGLAQ9Y4D2 1042 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 TCRBV5S4A2TA0A5A2 114 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 IDH1O75874 414 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 LDHBP07195 334 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 USP17L8P0C7I0 530 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 PDE6AP16499 860 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 RPS12P25398 132 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 CRKP46108 304 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 CACNB3P54284 484 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 DYNLL1P63167 89 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 FMR1Q06787 632 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 CFAP100Q494V2 611 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 TTC22Q5TAA0 569 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 APOBEC3HQ6NTF7 200 aaKnown RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 PRMT6Q96LA8 375 aaPredicted RBP9.73□□□□□ -0.85
TRIM49-202ENST00000532501 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
TRIM49-202ENST00000532501 GAKO14976 1311 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 SDSP20132 328 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 EPHX2P34913 555 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 PSEN1P49768 467 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 LSM11P83369 360 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRIM49-202ENST00000532501 KIF4BQ2VIQ3 1234 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 ERICH6Q7L0X2 663 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 MAGEB6Q8N7X4 407 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 KBTBD3Q8NAB2 608 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 TBC1D22AQ8WUA7 517 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
TRIM49-202ENST00000532501 MYOZ2Q9NPC6 264 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 RAI14Q9P0K7 980 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 HACL1Q9UJ83 578 aa9.72□□□□□ -0.85
TRIM49-202ENST00000532501 MYO3BQ8WXR4 1341 aa9.71□□□□□ -0.85
TRIM49-202ENST00000532501 CLRN2A0PK11 232 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 WNT10BO00744 389 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 SLURP2P0DP57 97 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 ADD2P35612 726 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 RHBDL3P58872 404 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 NFIAQ12857 509 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 MIGA1Q8NAN2 632 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 OSBP2Q969R2 916 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 GPATCH3Q96I76 525 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 LRP2BPQ9P2M1 347 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 DOCK2Q92608 1830 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 RFX7Q2KHR2 1363 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 MYH13Q9UKX3 1938 aa9.71□□□□□ -0.86
TRIM49-202ENST00000532501 MROH7-TTC4A0A0A0MT08 1334 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 ZNF532Q9HCE3 1301 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 A0A0D9SFI3 127 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 SMIM22K7EJ46 135 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 M0R2C6 588 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 FOXP2O15409 715 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 CYP7A1P22680 504 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
TRIM49-202ENST00000532501 CCDC129Q6ZRS4 1044 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 DZIP1Q86YF9 867 aaKnown RBP9.7□□□□□ -0.86
TRIM49-202ENST00000532501 FAM227BQ96M60 508 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 TDRD3Q9H7E2 651 aaKnown RBP9.7□□□□□ -0.86
TRIM49-202ENST00000532501 DDX4Q9NQI0 724 aaKnown RBP9.7□□□□□ -0.86
TRIM49-202ENST00000532501 ADARB2Q9NS39 739 aaKnown RBP9.7□□□□□ -0.86
TRIM49-202ENST00000532501 GGA3Q9NZ52 723 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 SUGT1Q9Y2Z0 365 aa9.7□□□□□ -0.86
TRIM49-202ENST00000532501 MAST2Q6P0Q8 1798 aa9.69□□□□□ -0.86
TRIM49-202ENST00000532501 ADM5C9JUS6 153 aa9.69□□□□□ -0.86
TRIM49-202ENST00000532501 ERC2O15083 957 aa9.69□□□□□ -0.86
TRIM49-202ENST00000532501 BTDP43251 543 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms