RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
KNL1-209ENST00000532347 PREX1Q8TCU6 1659 aa11.73□□□□□ -0.53
KNL1-209ENST00000532347 SEC31BQ9NQW1 1179 aa11.73□□□□□ -0.53
KNL1-209ENST00000532347 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
KNL1-209ENST00000532347 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
KNL1-209ENST00000532347 PLCH2O75038 1416 aa11.72□□□□□ -0.53
KNL1-209ENST00000532347 C9orf84Q5VXU9 1444 aa11.72□□□□□ -0.53
KNL1-209ENST00000532347 YEATS2Q9ULM3 1422 aa11.72□□□□□ -0.53
KNL1-209ENST00000532347 H3BRJ5 948 aa11.72□□□□□ -0.53
KNL1-209ENST00000532347 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
KNL1-209ENST00000532347 FANCCQ00597 558 aa11.72□□□□□ -0.53
KNL1-209ENST00000532347 IKBKEQ14164 716 aa11.72□□□□□ -0.53
KNL1-209ENST00000532347 LINC01387J3KSC0 135 aa11.71□□□□□ -0.53
KNL1-209ENST00000532347 B3GALT4O96024 378 aa11.71□□□□□ -0.53
KNL1-209ENST00000532347 ZNF76P36508 570 aa11.71□□□□□ -0.53
KNL1-209ENST00000532347 LINC00114Q6XXX2 140 aa11.71□□□□□ -0.53
KNL1-209ENST00000532347 ILDR2Q71H61 639 aa11.71□□□□□ -0.53
KNL1-209ENST00000532347 DMRTC2Q8IXT2 367 aaPredicted RBP11.71□□□□□ -0.53
KNL1-209ENST00000532347 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.53
KNL1-209ENST00000532347 ATP10AO60312 1499 aa11.7□□□□□ -0.54
KNL1-209ENST00000532347 SOX1O00570 391 aaPredicted RBP11.7□□□□□ -0.54
KNL1-209ENST00000532347 ZNF157P51786 506 aaPredicted RBP11.7□□□□□ -0.54
KNL1-209ENST00000532347 CCDC85BQ15834 202 aaPredicted RBP11.7□□□□□ -0.54
KNL1-209ENST00000532347 CEP44Q9C0F1 390 aa11.7□□□□□ -0.54
KNL1-209ENST00000532347 GPN3Q9UHW5 284 aaPredicted RBP11.7□□□□□ -0.54
KNL1-209ENST00000532347 HECW1Q76N89 1606 aa11.7□□□□□ -0.54
KNL1-209ENST00000532347 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
KNL1-209ENST00000532347 HDLBPQ00341 1268 aaKnown RBP11.69□□□□□ -0.54
KNL1-209ENST00000532347 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
KNL1-209ENST00000532347 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
KNL1-209ENST00000532347 NECAB3Q96P71 396 aaPredicted RBP11.69□□□□□ -0.54
KNL1-209ENST00000532347 TMEM39AQ9NV64 488 aa11.69□□□□□ -0.54
KNL1-209ENST00000532347 C9orf131Q5VYM1 1079 aa11.68□□□□□ -0.54
KNL1-209ENST00000532347 FAM117BQ6P1L5 589 aa11.68□□□□□ -0.54
KNL1-209ENST00000532347 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
KNL1-209ENST00000532347 SLC7A3Q8WY07 619 aa11.68□□□□□ -0.54
KNL1-209ENST00000532347 RNF34Q969K3 372 aa11.68□□□□□ -0.54
KNL1-209ENST00000532347 NOC4LQ9BVI4 516 aaKnown RBP11.68□□□□□ -0.54
KNL1-209ENST00000532347 PTPRTO14522 1441 aa11.68□□□□□ -0.54
KNL1-209ENST00000532347 KDM5CP41229 1560 aa11.67□□□□□ -0.54
KNL1-209ENST00000532347 ENC1O14682 589 aa11.67□□□□□ -0.54
KNL1-209ENST00000532347 FSCN2O14926 492 aa11.67□□□□□ -0.54
KNL1-209ENST00000532347 CELA3AP09093 270 aa11.67□□□□□ -0.54
KNL1-209ENST00000532347 PIP4K2BP78356 416 aa11.67□□□□□ -0.54
KNL1-209ENST00000532347 TRAPPC3LQ5T215 181 aa11.67□□□□□ -0.54
KNL1-209ENST00000532347 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
KNL1-209ENST00000532347 FMN1Q68DA7 1419 aa11.67□□□□□ -0.54
KNL1-209ENST00000532347 AGLP35573 1532 aa11.66□□□□□ -0.54
KNL1-209ENST00000532347 RANGAP1P46060 587 aaPredicted RBP11.66□□□□□ -0.54
KNL1-209ENST00000532347 INSM1Q01101 510 aaPredicted RBP11.66□□□□□ -0.54
KNL1-209ENST00000532347 SETDB1Q15047 1291 aa11.66□□□□□ -0.54
KNL1-209ENST00000532347 WNT8BQ93098 351 aa11.66□□□□□ -0.54
KNL1-209ENST00000532347 TRIM56Q9BRZ2 755 aaKnown RBP11.66□□□□□ -0.54
KNL1-209ENST00000532347 CARD10Q9BWT7 1032 aa11.66□□□□□ -0.54
KNL1-209ENST00000532347 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
KNL1-209ENST00000532347 UHRF1BP1Q6BDS2 1440 aa11.66□□□□□ -0.54
KNL1-209ENST00000532347 SCAPERQ9BY12 1400 aa11.66□□□□□ -0.54
KNL1-209ENST00000532347 GNB5O14775 395 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 PAGE1O75459 146 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 PPP2R3AQ06190 1150 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 C19orf57Q0VDD7 668 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 EFCAB2Q5VUJ9 269 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 HS2ST1Q7LGA3 356 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 PLVAPQ9BX97 442 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 SOX17Q9H6I2 414 aaPredicted RBP11.65□□□□□ -0.54
KNL1-209ENST00000532347 MKL2Q9ULH7 1088 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 MYO5CQ9NQX4 1742 aa11.65□□□□□ -0.54
KNL1-209ENST00000532347 DEAF1O75398 565 aaPredicted RBP11.64□□□□□ -0.55
KNL1-209ENST00000532347 GGT7Q9UJ14 662 aa11.64□□□□□ -0.55
KNL1-209ENST00000532347 ADAMTS8Q9UP79 889 aa11.64□□□□□ -0.55
KNL1-209ENST00000532347 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 SIGLEC1Q9BZZ2 1709 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 CNTLNQ9NXG0 1405 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 TM4SF5O14894 197 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 ARL4DP49703 201 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 ERMP1Q7Z2K6 904 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 NT5DC4Q86YG4 428 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 MAP4K3Q8IVH8 894 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 DTWD1Q8N5C7 304 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 GALNT11Q8NCW6 608 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 OSGEPQ9NPF4 335 aa11.63□□□□□ -0.55
KNL1-209ENST00000532347 A0A0A0MRY4 1105 aa11.62□□□□□ -0.55
KNL1-209ENST00000532347 HSPA2P54652 639 aa11.62□□□□□ -0.55
KNL1-209ENST00000532347 GSTM4Q03013 218 aa11.62□□□□□ -0.55
KNL1-209ENST00000532347 DDX54Q8TDD1 881 aaKnown RBP11.62□□□□□ -0.55
KNL1-209ENST00000532347 KLHDC7BQ96G42 594 aa11.62□□□□□ -0.55
KNL1-209ENST00000532347 SRA1Q9HD15 236 aaKnown RBP11.62□□□□□ -0.55
KNL1-209ENST00000532347 CNTNAP5Q8WYK1 1306 aa11.61□□□□□ -0.55
KNL1-209ENST00000532347 KIF14Q15058 1648 aa11.61□□□□□ -0.55
KNL1-209ENST00000532347 PIK3R2O00459 728 aa11.61□□□□□ -0.55
KNL1-209ENST00000532347 PODNQ7Z5L7 613 aa11.61□□□□□ -0.55
KNL1-209ENST00000532347 KLHL23Q8NBE8 558 aa11.61□□□□□ -0.55
KNL1-209ENST00000532347 COPRSQ9NQ92 184 aa11.61□□□□□ -0.55
KNL1-209ENST00000532347 STRCQ7RTU9 1775 aa11.61□□□□□ -0.55
KNL1-209ENST00000532347 CLIP1P30622 1438 aa11.6□□□□□ -0.55
KNL1-209ENST00000532347 F6X3S4 739 aa11.6□□□□□ -0.55
KNL1-209ENST00000532347 RAC1P63000 192 aa11.6□□□□□ -0.55
KNL1-209ENST00000532347 PCNX4Q63HM2 1172 aa11.6□□□□□ -0.55
KNL1-209ENST00000532347 SULF2Q8IWU5 870 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms