RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SYNE4Q8N205 404 aa9.14□□□□□ -0.95
CTNND1-230ENST00000532245 GPHNQ9NQX3 736 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-230ENST00000532245 ZNF277Q9NRM2 450 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-230ENST00000532245 ABCC4O15439 1325 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 GNA11P29992 359 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 AMPD3Q01432 767 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
CTNND1-230ENST00000532245 FER1L4A9Z1Z3 1794 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 ATP5JP18859 108 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 NASPP49321 788 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-230ENST00000532245 SSH3Q8TE77 659 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 FBXO41Q8TF61 875 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-230ENST00000532245 CARMIL3Q8ND23 1372 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 NFIXQ14938 502 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 CSRNP1Q96S65 589 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 RBM28Q9NW13 759 aaKnown RBP9.13□□□□□ -0.95
CTNND1-230ENST00000532245 DIP2AQ14689 1571 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 CALML3P27482 149 aa9.13□□□□□ -0.95
CTNND1-230ENST00000532245 CERKLQ49MI3 558 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-230ENST00000532245 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 PDE6AP16499 860 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 AOC3Q16853 763 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 TCERG1LQ5VWI1 586 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 MYL10Q9BUA6 226 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 TECPR2O15040 1411 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 MCM7P33993 719 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 KRT2P35908 639 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 PPARAQ07869 468 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 CCDC150Q8NCX0 1101 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 ARPP21Q9UBL0 812 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-230ENST00000532245 NEXMIFQ5QGS0 1516 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 AK2P54819 239 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 MAP3K11Q16584 847 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 DNAI2Q9GZS0 605 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 LRRIQ1Q96JM4 1722 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 TRPM1Q7Z4N2 1603 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
CTNND1-230ENST00000532245 KIF20AO95235 890 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 TBC1D10BQ4KMP7 808 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-230ENST00000532245 BRDTQ58F21 947 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-230ENST00000532245 RUFY3Q7L099 469 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 DRC1Q96MC2 740 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 TCHPQ9BT92 498 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 QRICH2Q9H0J4 1663 aa9.12□□□□□ -0.95
CTNND1-230ENST00000532245 BIN1O00499 593 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 CHMP2AO43633 222 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 ANAPC15P60006 121 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 STXBP4Q6ZWJ1 553 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 CAGE1Q8TC20 777 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 SLC27A2O14975 620 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 CFBP00751 764 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 MARCKSP29966 332 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 CNGA1P29973 690 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 SSR1P43307 286 aaKnown RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 ENOX2Q16206 610 aaKnown RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 SUPT20HL1Q3ZLR7 823 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 ISM2Q6H9L7 571 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 TTLL11Q8NHH1 800 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 NCAPD2Q15021 1401 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 OTUD7BQ6GQQ9 843 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 ARMC9Q7Z3E5 817 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 UIMC1Q96RL1 719 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 MMRN2Q9H8L6 949 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 NOP56O00567 594 aaKnown RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 LETM2Q2VYF4 491 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 MIGA2Q7L4E1 593 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 LRRC47Q8N1G4 583 aaKnown RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 SEC62Q99442 399 aaKnown RBP9.11□□□□□ -0.95
CTNND1-230ENST00000532245 GINS2Q9Y248 185 aa9.11□□□□□ -0.95
CTNND1-230ENST00000532245 CIAO1O76071 339 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 STAT6P42226 847 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 AFMP43652 599 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 GLIPR1L2Q4G1C9 344 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 TLR7Q9NYK1 1049 aaKnown RBP9.1□□□□□ -0.95
CTNND1-230ENST00000532245 ZNF853P0CG23 659 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 CCDC173Q0VFZ6 552 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 TMEM87BQ96K49 555 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 PREX1Q8TCU6 1659 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 DDX39AO00148 427 aaKnown RBP9.1□□□□□ -0.95
CTNND1-230ENST00000532245 DESP17661 470 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 ICA1Q05084 483 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 DIXDC1Q155Q3 683 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 TBC1D32Q96NH3 1257 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 hCG_1642624A0A1W2PR95 340 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 TRIM75PA6NK02 468 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 SMTNL1A8MU46 457 aa9.1□□□□□ -0.95
CTNND1-230ENST00000532245 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-230ENST00000532245 NCBP1Q09161 790 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms