RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 TUBB4AP04350 444 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 KRT40Q6A162 431 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 ZNF397Q8NF99 534 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-209ENST00000532145 AIFM3Q96NN9 605 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 MAP3K14Q99558 947 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 MORC2Q9Y6X9 1032 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-209ENST00000532145 AKAP11Q9UKA4 1901 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 SLU7O95391 586 aaKnown RBP16.34■□□□□ 0.21
LRRK1-209ENST00000532145 SHC4Q6S5L8 630 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
LRRK1-209ENST00000532145 TEX13AQ9BXU3 409 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-209ENST00000532145 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.34■□□□□ 0.21
LRRK1-209ENST00000532145 FANCCQ00597 558 aa16.33■□□□□ 0.21
LRRK1-209ENST00000532145 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.21
LRRK1-209ENST00000532145 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.21
LRRK1-209ENST00000532145 TMEM87BQ96K49 555 aa16.33■□□□□ 0.21
LRRK1-209ENST00000532145 NRDCO43847 1150 aa16.33■□□□□ 0.2
LRRK1-209ENST00000532145 ITGA6P23229 1130 aa16.33■□□□□ 0.2
LRRK1-209ENST00000532145 CDC27P30260 824 aa16.33■□□□□ 0.2
LRRK1-209ENST00000532145 NTRK3Q16288 839 aa16.33■□□□□ 0.2
LRRK1-209ENST00000532145 KMT5BQ4FZB7 885 aa16.33■□□□□ 0.2
LRRK1-209ENST00000532145 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.2
LRRK1-209ENST00000532145 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.2
LRRK1-209ENST00000532145 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-209ENST00000532145 RESP18Q5W5W9 173 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 SGMS1Q86VZ5 419 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 GREM2Q9H772 168 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-209ENST00000532145 PIH1D3Q9NQM4 214 aaKnown RBP16.32■□□□□ 0.2
LRRK1-209ENST00000532145 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 KIF20AO95235 890 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 ATP1A3P13637 1013 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 MYL5Q02045 173 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 TMOD3Q9NYL9 352 aa16.32■□□□□ 0.2
LRRK1-209ENST00000532145 MYO1BO43795 1136 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 CCDC93Q567U6 631 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 NLRP10Q86W26 655 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 PHKBQ93100 1093 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 SENP2Q9HC62 589 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 ZNF532Q9HCE3 1301 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 TCRBV5S4A2TA0A5A2 114 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 B4E1Z4 1266 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 ZBTB43O43298 467 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 RXRAP19793 462 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 CTSWP56202 376 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 ALX1Q15699 326 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 DNAJC10Q8IXB1 793 aa16.31■□□□□ 0.2
LRRK1-209ENST00000532145 FAM217BQ9NTX9 383 aaPredicted RBP16.31■□□□□ 0.2
LRRK1-209ENST00000532145 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 PDE8BO95263 885 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 PDE6AP16499 860 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 ELF2Q15723 593 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 MICU3Q86XE3 530 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 ELOA2Q8IYF1 753 aaPredicted RBP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 TMX1Q9H3N1 280 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 LY9Q9HBG7 655 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 CNNM1Q9NRU3 951 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 CUTAO60888 179 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 STARD3NLO95772 234 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 APPP05067 770 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 LIFRP42702 1097 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 FBXO38Q6PIJ6 1188 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 STRBPQ96SI9 672 aaKnown RBP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 FAM53CQ9NYF3 392 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 V9GYY5 206 aaPredicted RBP16.3■□□□□ 0.2
LRRK1-209ENST00000532145 UBN2Q6ZU65 1347 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 STK36Q9NRP7 1315 aa16.3■□□□□ 0.2
LRRK1-209ENST00000532145 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 UBASH3AP57075 661 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 PNOCQ13519 176 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
LRRK1-209ENST00000532145 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 METTL16Q86W50 562 aaKnown RBP16.29■□□□□ 0.2
LRRK1-209ENST00000532145 ZHX1Q9UKY1 873 aaPredicted RBP16.29■□□□□ 0.2
LRRK1-209ENST00000532145 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 CCP110O43303 1012 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
LRRK1-209ENST00000532145 TRIM29Q14134 588 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 HLFQ16534 295 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 SYT10Q6XYQ8 523 aa16.29■□□□□ 0.2
LRRK1-209ENST00000532145 UQCRFS1P1P0C7P4 283 aa16.28■□□□□ 0.2
LRRK1-209ENST00000532145 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
LRRK1-209ENST00000532145 KRBA2Q6ZNG9 492 aa16.28■□□□□ 0.2
LRRK1-209ENST00000532145 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
LRRK1-209ENST00000532145 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms