RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TNIP1Q15025 636 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 DOK7Q18PE1 504 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 ARSIQ5FYB1 569 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 CIAPIN1Q6FI81 312 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 NPAS4Q8IUM7 802 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 RDH13Q8NBN7 331 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 PRR7Q8TB68 274 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 KHSRPQ92945 711 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 ZNF594Q96JF6 807 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 YTHDC1Q96MU7 727 aaKnown RBP7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 MEIS3Q99687 375 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 DBNDD1Q9H9R9 158 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 CNNM1Q9NRU3 951 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 RCAN3Q9UKA8 241 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 PNMA3Q9UL41 463 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 NOVA2Q9UNW9 492 aaKnown RBP7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 TNNQ9UQP3 1299 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 LEMD3Q9Y2U8 911 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 DUOX1Q9NRD9 1551 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 ZNF804BA4D1E1 1349 aa7.19□□□□□ -1.26
HMGB1P42-201ENST00000532126 LRRC37AA6NMS7 1700 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 WTIPA6NIX2 430 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 PLIN1O60240 522 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 ECE2O60344 883 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 TAF5LO75529 589 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 COL9A1P20849 921 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 PHLDB3Q6NSJ2 640 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 DZIP1LQ8IYY4 767 aaKnown RBP7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 TMEM57Q8N5G2 664 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 HELBQ8NG08 1087 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 HACL1Q9UJ83 578 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 TSKSQ9UJT2 592 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 LRRFIP2Q9Y608 721 aaKnown RBP7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 MED23Q9ULK4 1368 aa7.18□□□□□ -1.26
HMGB1P42-201ENST00000532126 TAF1P21675 1872 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 YDJCA8MPS7 323 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 KDM4AO75164 1064 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 GNAI2P04899 355 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 EPHX2P34913 555 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 GMPSP49915 693 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 SCNN1DP51172 638 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 PPP4R3BQ5MIZ7 849 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 LHX8Q68G74 356 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 TBC1D9Q6ZT07 1266 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 PNMA8AQ86V59 439 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 ITPRIPQ8IWB1 547 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 DHX37Q8IY37 1157 aaKnown RBP7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 SMC1BQ8NDV3 1235 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 KLHDC4Q8TBB5 520 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 TATDN2Q93075 761 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 TRIM34Q9BYJ4 488 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 PUS3Q9BZE2 481 aaKnown RBP7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 COA1Q9GZY4 146 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 TAF1DQ9H5J8 278 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 TMEM134Q9H6X4 195 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 ZMIZ1Q9ULJ6 1067 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 MROH5Q6ZUA9 1318 aa7.17□□□□□ -1.26
HMGB1P42-201ENST00000532126 LTBP1Q14766 1721 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 WDR90Q96KV7 1748 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 PPP1R3GB7ZBB8 358 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 PSMD14O00487 310 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 SRGAP3O43295 1099 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 RLBP1P12271 317 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 KLRK1P26718 216 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 EPS15P42566 896 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 USP46P62068 366 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 FSTL1Q12841 308 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 LRRC24Q50LG9 513 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 EAPPQ56P03 285 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 METTL24Q5JXM2 366 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 NOP9Q86U38 636 aaKnown RBP7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 PACS2Q86VP3 889 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 TXNRD3Q86VQ6 643 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 KCNQ5Q9NR82 932 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 GPRC5DQ9NZD1 345 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 RIPOR2Q9Y4F9 1068 aa7.16□□□□□ -1.26
HMGB1P42-201ENST00000532126 MYH3P11055 1940 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 DICER1Q9UPY3 1922 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 USP17L3A6NCW0 530 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 USP17L4A6NCW7 530 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 H7C1D1 291 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 SNAP23O00161 211 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 EYA2O00167 538 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 GPR37L1O60883 481 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 CIAO1O76071 339 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 PDE8BO95263 885 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 VIL1P09327 827 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 POTEJP0CG39 1038 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 PTPREP23469 700 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 RPS12P25398 132 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 ERCC5P28715 1186 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 RFX5P48382 616 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 PTPN12Q05209 780 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 NOM1Q5C9Z4 860 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 C15orf52Q6ZUT6 534 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 USP50Q70EL3 339 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 USP17L1Q7RTZ2 530 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 ZNF804AQ7Z570 1209 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms