RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 EHMT1Q9H9B1 1298 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 DZANK1Q9NVP4 752 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 SLC12A7Q9Y666 1083 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 E2F8A0AVK6 867 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 FAM221AA4D161 298 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 IQCA1LA6NCM1 817 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 PHF20L1A8MW92 1017 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 F6X3S4 739 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 PPFIA4O75335 1185 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 MYCLP1P12525 358 aaPredicted RBP5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 MCM4P33991 863 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 RNF144AP50876 292 aaPredicted RBP5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 WDR4P57081 412 aaKnown RBP5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 NFKB2Q00653 900 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 SAFB2Q14151 953 aaKnown RBP eCLIP5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 LRRFIP1Q32MZ4 808 aaKnown RBP5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 LARP1BQ659C4 914 aaKnown RBP5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 TPTE2Q6XPS3 522 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 BICDL1Q6ZP65 573 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 EEPD1Q7L9B9 569 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 REC114Q7Z4M0 266 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 AIDAQ96BJ3 306 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 TCF12Q99081 682 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 SALL4Q9UJQ4 1053 aa5.68□□□□□ -1.5
AC055878.1-201ENST00000531858 A0A087X0B3 334 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 ENC1O14682 589 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 SH3BP5O60239 455 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 CILPO75339 1184 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 DDAH1O94760 285 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 ATE1O95260 518 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 F13A1P00488 732 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 CELA3AP09093 270 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 TIMP2P16035 220 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 TYRO3Q06418 890 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 NCAPHQ15003 741 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 FNDC3BQ53EP0 1204 aaKnown RBP5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 AKAP4Q5JQC9 854 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 SLC27A3Q5K4L6 730 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 FBXW10Q5XX13 1052 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 HGSNATQ68CP4 663 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 SPTY2D1Q68D10 685 aaPredicted RBP5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 NECAB2Q7Z6G3 386 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 LSRQ86X29 649 aaPredicted RBP5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 WDR75Q8IWA0 830 aaKnown RBP5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 FAM178BQ8IXR5 827 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 LRRC47Q8N1G4 583 aaKnown RBP5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 TAB3Q8N5C8 712 aaPredicted RBP5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 OR13H1Q8NG92 308 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 HSH2DQ96JZ2 352 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 TM9SF2Q99805 663 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 EFCC1Q9HA90 598 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 ARNT2Q9HBZ2 717 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 INTS7Q9NVH2 962 aaKnown RBP5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 TERF2IPQ9NYB0 399 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 CYP8B1Q9UNU6 501 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 WASHC2CQ9Y4E1 1318 aa5.67□□□□□ -1.5
AC055878.1-201ENST00000531858 KHNYNO15037 678 aaKnown RBP5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 DIAPH1O60610 1272 aaKnown RBP5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 RASGRP1O95267 797 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 BPNT1O95861 308 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 SOX18P35713 384 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 KRT76Q01546 638 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 SEPT6Q14141 434 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 LRRC14Q15048 493 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 BRD3Q15059 726 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 ZRSR2Q15696 482 aaKnown RBP5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 SPATC1Q76KD6 591 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 RNF180Q86T96 592 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 ZBTB38Q8NAP3 1195 aaPredicted RBP5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 SCYL1Q96KG9 808 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 KIF2CQ99661 725 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 RUSC1Q9BVN2 902 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 TNKS2Q9H2K2 1166 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 USP20Q9Y2K6 914 aa5.66□□□□□ -1.5
AC055878.1-201ENST00000531858 DNAJC25-GNG10A0A024R161 153 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 MEIS3P2A8K0S8 358 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 IFRD1O00458 451 aaPredicted RBP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 PLD2O14939 933 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 PDE8AO60658 829 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 ADAM23O75077 832 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 FBXO24O75426 580 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 KIF4AO95239 1232 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 HOXD8P13378 290 aaPredicted RBP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 KCNQ4P56696 695 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 PPP2R3AQ06190 1150 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 MCL1Q07820 350 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 PABPC4Q13310 644 aaKnown RBP eCLIP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 C6orf118Q5T5N4 469 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 ZNF385CQ66K41 422 aaPredicted RBP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 BNC2Q6ZN30 1099 aaPredicted RBP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 AFAP1L2Q8N4X5 818 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 RIN3Q8TB24 985 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 TSR2Q969E8 191 aaKnown RBP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 IL17RAQ96F46 866 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 SCARF2Q96GP6 870 aaPredicted RBP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 SLC39A13Q96H72 371 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 ZIC5Q96T25 663 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 BHLHE41Q9C0J9 482 aaPredicted RBP5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 SEC31BQ9NQW1 1179 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms