RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 GRK4P32298 578 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 TNNI2P48788 182 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 BCAMP50895 628 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 TCP10Q12799 353 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 PPIL2Q13356 520 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 APOBEC3HQ6NTF7 200 aaKnown RBP11.38□□□□□ -0.59
USF1-210ENST00000531842 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 RNF208Q9H0X6 261 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.38□□□□□ -0.59
USF1-210ENST00000531842 BIN2Q9UBW5 565 aaPredicted RBP11.38□□□□□ -0.59
USF1-210ENST00000531842 UNC80Q8N2C7 3258 aa11.38□□□□□ -0.59
USF1-210ENST00000531842 UBE4AQ14139 1066 aa11.37□□□□□ -0.59
USF1-210ENST00000531842 ARHGEF6Q15052 776 aa11.37□□□□□ -0.59
USF1-210ENST00000531842 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
USF1-210ENST00000531842 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
USF1-210ENST00000531842 ZFPM1Q8IX07 1006 aa11.37□□□□□ -0.59
USF1-210ENST00000531842 STAP2Q9UGK3 403 aa11.37□□□□□ -0.59
USF1-210ENST00000531842 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
USF1-210ENST00000531842 NBPF7P0C2Y1 421 aaPredicted RBP11.36□□□□□ -0.59
USF1-210ENST00000531842 GJA8P48165 433 aa11.36□□□□□ -0.59
USF1-210ENST00000531842 NFIAQ12857 509 aa11.36□□□□□ -0.59
USF1-210ENST00000531842 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
USF1-210ENST00000531842 GPAT2Q6NUI2 795 aa11.36□□□□□ -0.59
USF1-210ENST00000531842 CCDC84Q86UT8 332 aaPredicted RBP11.36□□□□□ -0.59
USF1-210ENST00000531842 U2AF1L4Q8WU68 220 aaKnown RBP11.36□□□□□ -0.59
USF1-210ENST00000531842 TEKT1Q969V4 418 aa11.36□□□□□ -0.59
USF1-210ENST00000531842 MYH2Q9UKX2 1941 aa11.36□□□□□ -0.59
USF1-210ENST00000531842 FRAT2O75474 233 aaPredicted RBP11.35□□□□□ -0.59
USF1-210ENST00000531842 FARP2O94887 1054 aaPredicted RBP11.35□□□□□ -0.59
USF1-210ENST00000531842 GJB1P08034 283 aa11.35□□□□□ -0.59
USF1-210ENST00000531842 Q7L0L9 218 aa11.35□□□□□ -0.59
USF1-210ENST00000531842 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
USF1-210ENST00000531842 VPS37DQ86XT2 251 aa11.35□□□□□ -0.59
USF1-210ENST00000531842 DIS3LQ8TF46 1054 aaKnown RBP11.35□□□□□ -0.59
USF1-210ENST00000531842 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
USF1-210ENST00000531842 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
USF1-210ENST00000531842 BCRP11274 1271 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 PPATQ06203 517 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 ANKRD44Q8N8A2 993 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 VGLL2Q8N8G2 317 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 ZDHHC15Q96MV8 337 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 ZNF341Q9BYN7 854 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 DOCK1Q14185 1865 aa11.34□□□□□ -0.59
USF1-210ENST00000531842 PLXNB2O15031 1838 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.6
USF1-210ENST00000531842 WDHD1O75717 1129 aaPredicted RBP11.33□□□□□ -0.6
USF1-210ENST00000531842 CDC42EP5Q6NZY7 148 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 FAM83AQ86UY5 434 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 DEFB118Q96PH6 123 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 TMOD2Q9NZR1 351 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 FAM198AQ9UFP1 575 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 ZMYND8Q9ULU4 1186 aaPredicted RBP11.33□□□□□ -0.6
USF1-210ENST00000531842 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
USF1-210ENST00000531842 LAMA2P24043 3122 aaKnown RBP11.33□□□□□ -0.6
USF1-210ENST00000531842 ATAD5Q96QE3 1844 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 ADCY3O60266 1144 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 EVI5O60447 810 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 SGPL1O95470 568 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 GNRH1P01148 92 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 INHAP05111 366 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 PRDX5P30044 214 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
USF1-210ENST00000531842 FLT3LGP49771 235 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 PRMT2P55345 433 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 GADL1Q6ZQY3 521 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 PAWRQ96IZ0 340 aaKnown RBP11.32□□□□□ -0.6
USF1-210ENST00000531842 ZCCHC17Q9NP64 241 aaKnown RBP11.32□□□□□ -0.6
USF1-210ENST00000531842 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 DAGLAQ9Y4D2 1042 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 IL16Q14005 1332 aa11.32□□□□□ -0.6
USF1-210ENST00000531842 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
USF1-210ENST00000531842 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
USF1-210ENST00000531842 SYN1P17600 705 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 FCGRTP55899 365 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
USF1-210ENST00000531842 TRIM32Q13049 653 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 DCAF15Q66K64 600 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 FAM151AQ8WW52 585 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 NR2E3Q9Y5X4 410 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 EYSQ5T1H1 3165 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
USF1-210ENST00000531842 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 PEX10O60683 326 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 PDE8BO95263 885 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 HOXD10P28358 340 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 UBXN2AP68543 259 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 C7orf61Q8IZ16 206 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 TBC1D22AQ8WUA7 517 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 ZHX2Q9Y6X8 837 aa11.3□□□□□ -0.6
USF1-210ENST00000531842 VCANP13611 3396 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms