RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SPDYE5A6NIY4 337 aa20.88■□□□□ 0.93
CPSF1-207ENST00000531727 BCAR3O75815 825 aa20.88■□□□□ 0.93
CPSF1-207ENST00000531727 GTF2A2P52657 109 aa20.88■□□□□ 0.93
CPSF1-207ENST00000531727 CCDC102BQ68D86 513 aa20.88■□□□□ 0.93
CPSF1-207ENST00000531727 CDC42EP5Q6NZY7 148 aa20.88■□□□□ 0.93
CPSF1-207ENST00000531727 ATF7IPQ6VMQ6 1270 aa20.88■□□□□ 0.93
CPSF1-207ENST00000531727 BRI3BPQ8WY22 251 aa20.88■□□□□ 0.93
CPSF1-207ENST00000531727 CCL15-CCL14A0A0B4J2E2 113 aa20.87■□□□□ 0.93
CPSF1-207ENST00000531727 CCL15Q16663 113 aa20.87■□□□□ 0.93
CPSF1-207ENST00000531727 OTOP1Q7RTM1 612 aa20.87■□□□□ 0.93
CPSF1-207ENST00000531727 FRAT1Q92837 279 aaPredicted RBP20.87■□□□□ 0.93
CPSF1-207ENST00000531727 ZKSCAN4Q969J2 545 aaPredicted RBP20.87■□□□□ 0.93
CPSF1-207ENST00000531727 ERO1AQ96HE7 468 aa20.87■□□□□ 0.93
CPSF1-207ENST00000531727 TNNQ9UQP3 1299 aa20.87■□□□□ 0.93
CPSF1-207ENST00000531727 AKAP2Q9Y2D5 859 aa20.87■□□□□ 0.93
CPSF1-207ENST00000531727 TRIM17Q9Y577 477 aa20.87■□□□□ 0.93
CPSF1-207ENST00000531727 TIMM10P62072 90 aa20.86■□□□□ 0.93
CPSF1-207ENST00000531727 TFCP2Q12800 502 aa20.86■□□□□ 0.93
CPSF1-207ENST00000531727 ERO1BQ86YB8 467 aa20.86■□□□□ 0.93
CPSF1-207ENST00000531727 ZGPATQ8N5A5 531 aaKnown RBP20.86■□□□□ 0.93
CPSF1-207ENST00000531727 ZNF341Q9BYN7 854 aa20.86■□□□□ 0.93
CPSF1-207ENST00000531727 PDS5AQ29RF7 1337 aaKnown RBP20.85■□□□□ 0.93
CPSF1-207ENST00000531727 MYH2Q9UKX2 1941 aa20.85■□□□□ 0.93
CPSF1-207ENST00000531727 TCP10Q12799 353 aa20.85■□□□□ 0.93
CPSF1-207ENST00000531727 CD99L2Q8TCZ2 262 aa20.85■□□□□ 0.93
CPSF1-207ENST00000531727 A0A1B0GUL7 405 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 GNAI2P04899 355 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 SP3Q02447 781 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 NFIAQ12857 509 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 RASGRF1Q13972 1273 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 TAF1CQ15572 869 aaPredicted RBP20.84■□□□□ 0.93
CPSF1-207ENST00000531727 MIGA2Q7L4E1 593 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 XAGE2Q96GT9 111 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 USP40Q9NVE5 1235 aa20.84■□□□□ 0.93
CPSF1-207ENST00000531727 AK9Q5TCS8 1911 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 CETPP11597 493 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 PPIL2Q13356 520 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 MVPQ14764 893 aaKnown RBP20.83■□□□□ 0.93
CPSF1-207ENST00000531727 FAM43AQ8N2R8 423 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 CLUAP1Q96AJ1 413 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 ZFYVE28Q9HCC9 887 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 FAM198AQ9UFP1 575 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 ZNF112Q9UJU3 913 aa20.83■□□□□ 0.93
CPSF1-207ENST00000531727 GAKO14976 1311 aa20.82■□□□□ 0.92
CPSF1-207ENST00000531727 IRF6O14896 467 aa20.82■□□□□ 0.92
CPSF1-207ENST00000531727 INPP5BP32019 993 aa20.82■□□□□ 0.92
CPSF1-207ENST00000531727 SNAPC2Q13487 334 aa20.82■□□□□ 0.92
CPSF1-207ENST00000531727 DZIP1Q86YF9 867 aaKnown RBP20.82■□□□□ 0.92
CPSF1-207ENST00000531727 ABCF2Q9UG63 623 aa20.82■□□□□ 0.92
CPSF1-207ENST00000531727 DOCK2Q92608 1830 aa20.82■□□□□ 0.92
CPSF1-207ENST00000531727 PNMA6EA0A0J9YXQ4 647 aa20.81■□□□□ 0.92
CPSF1-207ENST00000531727 PPATQ06203 517 aa20.81■□□□□ 0.92
CPSF1-207ENST00000531727 SPTY2D1Q68D10 685 aaPredicted RBP20.81■□□□□ 0.92
CPSF1-207ENST00000531727 SLF2Q8IX21 1173 aa20.81■□□□□ 0.92
CPSF1-207ENST00000531727 EFCC1Q9HA90 598 aa20.81■□□□□ 0.92
CPSF1-207ENST00000531727 ZCCHC17Q9NP64 241 aaKnown RBP20.81■□□□□ 0.92
CPSF1-207ENST00000531727 PTPN22Q9Y2R2 807 aa20.81■□□□□ 0.92
CPSF1-207ENST00000531727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.81■□□□□ 0.92
CPSF1-207ENST00000531727 HTTP42858 3142 aa20.8■□□□□ 0.92
CPSF1-207ENST00000531727 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
CPSF1-207ENST00000531727 ZKSCAN2Q63HK3 967 aa20.8■□□□□ 0.92
CPSF1-207ENST00000531727 TMEM57Q8N5G2 664 aa20.8■□□□□ 0.92
CPSF1-207ENST00000531727 FAM163AQ96GL9 167 aaPredicted RBP20.8■□□□□ 0.92
CPSF1-207ENST00000531727 NEUROD6Q96NK8 337 aa20.8■□□□□ 0.92
CPSF1-207ENST00000531727 IDI2Q9BXS1 227 aa20.8■□□□□ 0.92
CPSF1-207ENST00000531727 RFX7Q2KHR2 1363 aa20.8■□□□□ 0.92
CPSF1-207ENST00000531727 BTBD19C9JJ37 291 aa20.79■□□□□ 0.92
CPSF1-207ENST00000531727 WDHD1O75717 1129 aaPredicted RBP20.79■□□□□ 0.92
CPSF1-207ENST00000531727 CAP1Q01518 475 aa20.79■□□□□ 0.92
CPSF1-207ENST00000531727 ZFPM1Q8IX07 1006 aa20.79■□□□□ 0.92
CPSF1-207ENST00000531727 MIER1Q8N108 512 aa20.79■□□□□ 0.92
CPSF1-207ENST00000531727 ATRNL1Q5VV63 1379 aa20.78■□□□□ 0.92
CPSF1-207ENST00000531727 ENTPD3O75355 529 aa20.78■□□□□ 0.92
CPSF1-207ENST00000531727 RGS3P49796 1198 aa20.78■□□□□ 0.92
CPSF1-207ENST00000531727 G3BP1Q13283 466 aaKnown RBP eCLIP20.78■□□□□ 0.92
CPSF1-207ENST00000531727 NOL9Q5SY16 702 aaKnown RBP20.78■□□□□ 0.92
CPSF1-207ENST00000531727 MROH7-TTC4A0A0A0MT08 1334 aa20.78■□□□□ 0.92
CPSF1-207ENST00000531727 TLR2O60603 784 aa20.77■□□□□ 0.92
CPSF1-207ENST00000531727 ARHGEF6Q15052 776 aa20.77■□□□□ 0.92
CPSF1-207ENST00000531727 GORABQ5T7V8 394 aa20.77■□□□□ 0.92
CPSF1-207ENST00000531727 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.92
CPSF1-207ENST00000531727 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.77■□□□□ 0.92
CPSF1-207ENST00000531727 HMG20BQ9P0W2 317 aa20.77■□□□□ 0.92
CPSF1-207ENST00000531727 ARID4AP29374 1257 aaPredicted RBP20.76■□□□□ 0.91
CPSF1-207ENST00000531727 BTDP43251 543 aa20.76■□□□□ 0.91
CPSF1-207ENST00000531727 MECOMQ03112 1051 aa20.76■□□□□ 0.91
CPSF1-207ENST00000531727 SPATA5Q8NB90 893 aa20.76■□□□□ 0.91
CPSF1-207ENST00000531727 KCNH4Q9UQ05 1017 aa20.76■□□□□ 0.91
CPSF1-207ENST00000531727 RBBP6Q7Z6E9 1792 aaKnown RBP20.76■□□□□ 0.91
CPSF1-207ENST00000531727 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
CPSF1-207ENST00000531727 SH3BP5LQ7L8J4 393 aa20.75■□□□□ 0.91
CPSF1-207ENST00000531727 ZSCAN29Q8IWY8 852 aaPredicted RBP20.75■□□□□ 0.91
CPSF1-207ENST00000531727 ZNF384Q8TF68 577 aa20.75■□□□□ 0.91
CPSF1-207ENST00000531727 GPR75-ASB3A0A0A6YYF3 556 aa20.74■□□□□ 0.91
CPSF1-207ENST00000531727 PHF20L1A8MW92 1017 aa20.74■□□□□ 0.91
CPSF1-207ENST00000531727 POLA2Q14181 598 aa20.74■□□□□ 0.91
CPSF1-207ENST00000531727 PI16Q6UXB8 463 aa20.74■□□□□ 0.91
CPSF1-207ENST00000531727 ANKRD23Q86SG2 305 aa20.74■□□□□ 0.91
CPSF1-207ENST00000531727 ARMC5Q96C12 935 aa20.74■□□□□ 0.91
CPSF1-207ENST00000531727 DDX4Q9NQI0 724 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms