RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 G3BP1Q13283 466 aaKnown RBP eCLIP16.24■□□□□ 0.19
SF3B2-212ENST00000531589 DIXDC1Q155Q3 683 aa16.24■□□□□ 0.19
SF3B2-212ENST00000531589 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
SF3B2-212ENST00000531589 NEUROD6Q96NK8 337 aa16.24■□□□□ 0.19
SF3B2-212ENST00000531589 DAGLAQ9Y4D2 1042 aa16.24■□□□□ 0.19
SF3B2-212ENST00000531589 IGF2BP3O00425 579 aaKnown RBP eCLIP16.23■□□□□ 0.19
SF3B2-212ENST00000531589 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
SF3B2-212ENST00000531589 ADORA1P30542 326 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 GJA5P36382 358 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 CDC42EP5Q6NZY7 148 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 TMEM57Q8N5G2 664 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 XAGE2Q96GT9 111 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 WRNIP1Q96S55 665 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 USP40Q9NVE5 1235 aa16.23■□□□□ 0.19
SF3B2-212ENST00000531589 SPDYE5A6NIY4 337 aa16.22■□□□□ 0.19
SF3B2-212ENST00000531589 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
SF3B2-212ENST00000531589 FBXO46Q6PJ61 603 aaPredicted RBP16.22■□□□□ 0.19
SF3B2-212ENST00000531589 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
SF3B2-212ENST00000531589 DZIP1Q86YF9 867 aaKnown RBP16.22■□□□□ 0.19
SF3B2-212ENST00000531589 R3HDMLQ9H3Y0 253 aa16.22■□□□□ 0.19
SF3B2-212ENST00000531589 ABCF2Q9UG63 623 aa16.22■□□□□ 0.19
SF3B2-212ENST00000531589 HPS5Q9UPZ3 1129 aa16.22■□□□□ 0.19
SF3B2-212ENST00000531589 TNNQ9UQP3 1299 aa16.22■□□□□ 0.19
SF3B2-212ENST00000531589 MYH13Q9UKX3 1938 aa16.21■□□□□ 0.19
SF3B2-212ENST00000531589 CCL15-CCL14A0A0B4J2E2 113 aa16.21■□□□□ 0.19
SF3B2-212ENST00000531589 TCP10Q12799 353 aa16.21■□□□□ 0.19
SF3B2-212ENST00000531589 CCL15Q16663 113 aa16.21■□□□□ 0.19
SF3B2-212ENST00000531589 OTUD5Q96G74 571 aa16.21■□□□□ 0.19
SF3B2-212ENST00000531589 ERO1AQ96HE7 468 aa16.21■□□□□ 0.19
SF3B2-212ENST00000531589 MS4A4AQ96JQ5 239 aa16.21■□□□□ 0.19
SF3B2-212ENST00000531589 PNMA6EA0A0J9YXQ4 647 aa16.2■□□□□ 0.18
SF3B2-212ENST00000531589 CRHR2Q13324 411 aa16.2■□□□□ 0.18
SF3B2-212ENST00000531589 ARHGEF6Q15052 776 aa16.2■□□□□ 0.18
SF3B2-212ENST00000531589 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
SF3B2-212ENST00000531589 MIGA2Q7L4E1 593 aa16.2■□□□□ 0.18
SF3B2-212ENST00000531589 FAM163AQ96GL9 167 aaPredicted RBP16.2■□□□□ 0.18
SF3B2-212ENST00000531589 PTPN18Q99952 460 aa16.2■□□□□ 0.18
SF3B2-212ENST00000531589 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 ENTPD3O75355 529 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 CETPP11597 493 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 NFIAQ12857 509 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 SNAPC2Q13487 334 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 ZKSCAN4Q969J2 545 aaPredicted RBP16.19■□□□□ 0.18
SF3B2-212ENST00000531589 ZFYVE28Q9HCC9 887 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 SNCAIPQ9Y6H5 919 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 GAKO14976 1311 aa16.19■□□□□ 0.18
SF3B2-212ENST00000531589 LAMB1P07942 1786 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 LDHCP07864 332 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 UQCRFS1P1P0C7P4 283 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 GSTO1P78417 241 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 ATP8B2P98198 1209 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 SP3Q02447 781 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 PPATQ06203 517 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 PPIL2Q13356 520 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
SF3B2-212ENST00000531589 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 SPATA5Q8NB90 893 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 BRI3BPQ8WY22 251 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 IDI2Q9BXS1 227 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 ZCCHC17Q9NP64 241 aaKnown RBP16.18■□□□□ 0.18
SF3B2-212ENST00000531589 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 FAM198AQ9UFP1 575 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 TRIM17Q9Y577 477 aa16.18■□□□□ 0.18
SF3B2-212ENST00000531589 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
SF3B2-212ENST00000531589 POLA2Q14181 598 aa16.17■□□□□ 0.18
SF3B2-212ENST00000531589 TAF1CQ15572 869 aaPredicted RBP16.17■□□□□ 0.18
SF3B2-212ENST00000531589 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
SF3B2-212ENST00000531589 HMG20BQ9P0W2 317 aa16.17■□□□□ 0.18
SF3B2-212ENST00000531589 ZNF112Q9UJU3 913 aa16.17■□□□□ 0.18
SF3B2-212ENST00000531589 IRF6O14896 467 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
SF3B2-212ENST00000531589 MAP4K4O95819 1239 aaPredicted RBP16.16■□□□□ 0.18
SF3B2-212ENST00000531589 MS4A1P11836 297 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
SF3B2-212ENST00000531589 RGS3P49796 1198 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 SOX10P56693 466 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 MECOMQ03112 1051 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 OTOP1Q7RTM1 612 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
SF3B2-212ENST00000531589 MROH7-TTC4A0A0A0MT08 1334 aa16.16■□□□□ 0.18
SF3B2-212ENST00000531589 GPR75-ASB3A0A0A6YYF3 556 aa16.15■□□□□ 0.18
SF3B2-212ENST00000531589 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
SF3B2-212ENST00000531589 INPP5BP32019 993 aa16.15■□□□□ 0.18
SF3B2-212ENST00000531589 BTDP43251 543 aa16.15■□□□□ 0.18
SF3B2-212ENST00000531589 FAM43AQ8N2R8 423 aa16.15■□□□□ 0.18
SF3B2-212ENST00000531589 EFCC1Q9HA90 598 aa16.15■□□□□ 0.18
SF3B2-212ENST00000531589 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
SF3B2-212ENST00000531589 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.15■□□□□ 0.18
SF3B2-212ENST00000531589 IGSF3O75054 1194 aa16.14■□□□□ 0.17
SF3B2-212ENST00000531589 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
SF3B2-212ENST00000531589 TTC39AQ5SRH9 613 aa16.14■□□□□ 0.17
SF3B2-212ENST00000531589 NOL9Q5SY16 702 aaKnown RBP16.14■□□□□ 0.17
SF3B2-212ENST00000531589 CD99L2Q8TCZ2 262 aa16.14■□□□□ 0.17
SF3B2-212ENST00000531589 NOL10Q9BSC4 688 aaKnown RBP16.14■□□□□ 0.17
SF3B2-212ENST00000531589 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
SF3B2-212ENST00000531589 FPGT-TNNI3KV9GXZ4 949 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms