RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CCDC102BQ68D86 513 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 CDC42EP5Q6NZY7 148 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 ATF7IPQ6VMQ6 1270 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 FAM151AQ8WW52 585 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 BRI3BPQ8WY22 251 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 OTUD5Q96G74 571 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 WRNIP1Q96S55 665 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 TNNQ9UQP3 1299 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 SNCAIPQ9Y6H5 919 aa19.59■□□□□ 0.73
CPSF1-205ENST00000531042 CCL15-CCL14A0A0B4J2E2 113 aa19.58■□□□□ 0.72
CPSF1-205ENST00000531042 CCL15Q16663 113 aa19.58■□□□□ 0.72
CPSF1-205ENST00000531042 FRAT1Q92837 279 aaPredicted RBP19.58■□□□□ 0.72
CPSF1-205ENST00000531042 ZKSCAN4Q969J2 545 aaPredicted RBP19.58■□□□□ 0.72
CPSF1-205ENST00000531042 ERO1AQ96HE7 468 aa19.58■□□□□ 0.72
CPSF1-205ENST00000531042 TRIM17Q9Y577 477 aa19.58■□□□□ 0.72
CPSF1-205ENST00000531042 TCP10Q12799 353 aa19.57■□□□□ 0.72
CPSF1-205ENST00000531042 TFCP2Q12800 502 aa19.57■□□□□ 0.72
CPSF1-205ENST00000531042 MIGA2Q7L4E1 593 aa19.57■□□□□ 0.72
CPSF1-205ENST00000531042 OTOP1Q7RTM1 612 aa19.57■□□□□ 0.72
CPSF1-205ENST00000531042 ERO1BQ86YB8 467 aa19.57■□□□□ 0.72
CPSF1-205ENST00000531042 USP40Q9NVE5 1235 aa19.57■□□□□ 0.72
CPSF1-205ENST00000531042 AKAP2Q9Y2D5 859 aa19.57■□□□□ 0.72
CPSF1-205ENST00000531042 HTTP42858 3142 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 A0A1B0GUL7 405 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 GNAI2P04899 355 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 SP3Q02447 781 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 NFIAQ12857 509 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 RASGRF1Q13972 1273 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 ZGPATQ8N5A5 531 aaKnown RBP19.56■□□□□ 0.72
CPSF1-205ENST00000531042 CD99L2Q8TCZ2 262 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 CLUAP1Q96AJ1 413 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 XAGE2Q96GT9 111 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 ZNF341Q9BYN7 854 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 FAM198AQ9UFP1 575 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 AK9Q5TCS8 1911 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 MYH2Q9UKX2 1941 aa19.56■□□□□ 0.72
CPSF1-205ENST00000531042 PDS5AQ29RF7 1337 aaKnown RBP19.55■□□□□ 0.72
CPSF1-205ENST00000531042 TAF1CQ15572 869 aaPredicted RBP19.55■□□□□ 0.72
CPSF1-205ENST00000531042 FAM43AQ8N2R8 423 aa19.55■□□□□ 0.72
CPSF1-205ENST00000531042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.55■□□□□ 0.72
CPSF1-205ENST00000531042 IRF6O14896 467 aa19.54■□□□□ 0.72
CPSF1-205ENST00000531042 CETPP11597 493 aa19.54■□□□□ 0.72
CPSF1-205ENST00000531042 PPIL2Q13356 520 aa19.54■□□□□ 0.72
CPSF1-205ENST00000531042 ZFYVE28Q9HCC9 887 aa19.54■□□□□ 0.72
CPSF1-205ENST00000531042 ZNF112Q9UJU3 913 aa19.54■□□□□ 0.72
CPSF1-205ENST00000531042 GAKO14976 1311 aa19.53■□□□□ 0.72
CPSF1-205ENST00000531042 INPP5BP32019 993 aa19.53■□□□□ 0.72
CPSF1-205ENST00000531042 PPATQ06203 517 aa19.53■□□□□ 0.72
CPSF1-205ENST00000531042 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
CPSF1-205ENST00000531042 ABCF2Q9UG63 623 aa19.53■□□□□ 0.72
CPSF1-205ENST00000531042 PTPN22Q9Y2R2 807 aa19.53■□□□□ 0.72
CPSF1-205ENST00000531042 PNMA6EA0A0J9YXQ4 647 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 CAP1Q01518 475 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 SNAPC2Q13487 334 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 ZKSCAN2Q63HK3 967 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 SPTY2D1Q68D10 685 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-205ENST00000531042 DZIP1Q86YF9 867 aaKnown RBP19.52■□□□□ 0.72
CPSF1-205ENST00000531042 ZFPM1Q8IX07 1006 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 MIER1Q8N108 512 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 FAM163AQ96GL9 167 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-205ENST00000531042 NEUROD6Q96NK8 337 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 IDI2Q9BXS1 227 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 EFCC1Q9HA90 598 aa19.52■□□□□ 0.72
CPSF1-205ENST00000531042 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
CPSF1-205ENST00000531042 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
CPSF1-205ENST00000531042 SLF2Q8IX21 1173 aa19.51■□□□□ 0.71
CPSF1-205ENST00000531042 ZCCHC17Q9NP64 241 aaKnown RBP19.51■□□□□ 0.71
CPSF1-205ENST00000531042 ENTPD3O75355 529 aa19.5■□□□□ 0.71
CPSF1-205ENST00000531042 RGS3P49796 1198 aa19.5■□□□□ 0.71
CPSF1-205ENST00000531042 G3BP1Q13283 466 aaKnown RBP eCLIP19.5■□□□□ 0.71
CPSF1-205ENST00000531042 DOCK2Q92608 1830 aa19.5■□□□□ 0.71
CPSF1-205ENST00000531042 RFX7Q2KHR2 1363 aa19.49■□□□□ 0.71
CPSF1-205ENST00000531042 ATRNL1Q5VV63 1379 aa19.49■□□□□ 0.71
CPSF1-205ENST00000531042 CENPFP49454 3210 aa19.49■□□□□ 0.71
CPSF1-205ENST00000531042 WDHD1O75717 1129 aaPredicted RBP19.49■□□□□ 0.71
CPSF1-205ENST00000531042 NOL9Q5SY16 702 aaKnown RBP19.49■□□□□ 0.71
CPSF1-205ENST00000531042 ERICH6Q7L0X2 663 aa19.49■□□□□ 0.71
CPSF1-205ENST00000531042 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.49■□□□□ 0.71
CPSF1-205ENST00000531042 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
CPSF1-205ENST00000531042 TLR2O60603 784 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 BTDP43251 543 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 MECOMQ03112 1051 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 ARHGEF6Q15052 776 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 GORABQ5T7V8 394 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 SPATA5Q8NB90 893 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 KCNH4Q9UQ05 1017 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 PDE4DIPQ5VU43 2346 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 MROH7-TTC4A0A0A0MT08 1334 aa19.48■□□□□ 0.71
CPSF1-205ENST00000531042 ARID4AP29374 1257 aaPredicted RBP19.47■□□□□ 0.71
CPSF1-205ENST00000531042 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
CPSF1-205ENST00000531042 PI16Q6UXB8 463 aa19.47■□□□□ 0.71
CPSF1-205ENST00000531042 SH3BP5LQ7L8J4 393 aa19.47■□□□□ 0.71
CPSF1-205ENST00000531042 ZNF384Q8TF68 577 aa19.47■□□□□ 0.71
CPSF1-205ENST00000531042 DDX4Q9NQI0 724 aaKnown RBP19.47■□□□□ 0.71
CPSF1-205ENST00000531042 GPR75-ASB3A0A0A6YYF3 556 aa19.46■□□□□ 0.71
CPSF1-205ENST00000531042 PHF20L1A8MW92 1017 aa19.46■□□□□ 0.71
CPSF1-205ENST00000531042 MAP3K10Q02779 954 aa19.46■□□□□ 0.71
CPSF1-205ENST00000531042 POLA2Q14181 598 aa19.46■□□□□ 0.71
CPSF1-205ENST00000531042 ANKRD23Q86SG2 305 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms